Experiment ID: 2429

Field Description
nameprokaryotic diversity in mangrove sediments across southeastern china fundamentally differs from that in other biomes (6739103) - gpt-5
proj_id6739103
sraprjna475455
date_of_upload17/03/2026 14:56
doi10.1128/msystems.00442-19
modelgpt-5
sample_groups_version18
dbbact_id571
dbbact_linkhttps://dbbact.org/exp_info/571
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
marsh0.428571
sporobolus alterniflorus0.428571
estuary0.400000
sediment surface0.400000
LOWER IN mudflat0.400000
mudflat0.352941
coast0.333333
depth (sediment) 0-20cm0.285714
LOWER IN marsh0.222222
LOWER IN sporobolus alterniflorus0.200000
LOWER IN sediment0.181818
sediment0.063291
china0.009390
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN marsh1.000000
LOWER IN mudflat1.000000
LOWER IN sporobolus alterniflorus0.500000
marsh0.500000
sporobolus alterniflorus0.500000
mudflat0.333333
estuary0.250000
sediment surface0.250000
coast0.200000
depth (sediment) 0-20cm0.166667
LOWER IN sediment0.142857
sediment0.033333
china0.004717
Fraction of annotations for the query sequences containing the term
TermScore
china1.000000
subsurface sediment1.000000
depth (sediment) 0-20cm1.000000
estuary1.000000
depth (sediment) 10-20 cm1.000000
southeastern china floristic province1.000000
sediment surface1.000000
protected area1.000000
coast1.000000
sediment0.625000
intertidal zone0.375000
mudflat0.375000
marsh0.375000
sporobolus alterniflorus0.375000
biological invasion0.375000
LOWER IN sediment0.250000
LOWER IN intertidal zone0.250000
LOWER IN mudflat0.250000
LOWER IN marsh0.125000
LOWER IN sporobolus alterniflorus0.125000
LOWER IN biological invasion0.125000
Number of experiments associating the term to the sequence
TermScore
intertidal zone1.000000
mudflat1.000000
LOWER IN sediment1.000000
LOWER IN marsh1.000000
LOWER IN sporobolus alterniflorus1.000000
LOWER IN biological invasion1.000000
china1.000000
subsurface sediment1.000000
depth (sediment) 0-20cm1.000000
estuary1.000000
depth (sediment) 10-20 cm1.000000
southeastern china floristic province1.000000
sediment surface1.000000
protected area1.000000
coast1.000000
sediment1.000000
marsh1.000000
sporobolus alterniflorus1.000000
biological invasion1.000000
LOWER IN intertidal zone1.000000
LOWER IN mudflat1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2429gpt-5S. alterniflora sediment samples (southeastern China) (dominant sediment, china, subsurface sediment, estuary, depth (sediment) 0-20cm, sporobolus alterniflorus, southeastern china floristic province, depth (sediment) 10-20 cm, sediment surface, biological invasion, protected area, marsh, coast)2026-03-17v41 / 2pendingNo
2429gpt-5Mangrove sediment samples (southeastern China) (common sediment, china, subsurface sediment, estuary, depth (sediment) 0-20cm, depth (sediment) 10-20 cm, southeastern china floristic province, sediment surface, protected area, coast)2026-03-17v41 / 291pendingNo
2429gpt-5S. alterniflora sediment samples (southeastern China) (common sediment, china, subsurface sediment, estuary, depth (sediment) 0-20cm, sporobolus alterniflorus, southeastern china floristic province, depth (sediment) 10-20 cm, sediment surface, biological invasion, protected area, marsh, coast)2026-03-17v41 / 595pendingNo
2429gpt-5Mudflat sediment samples (southeastern China) (common china, subsurface sediment, estuary, depth (sediment) 0-20cm, mudflat, southeastern china floristic province, intertidal zone, depth (sediment) 10-20 cm, sediment surface, protected area, coast)2026-03-17v41 / 667pendingNo
2429gpt-5Mangrove vs mudflat sediment microbiomes (vegetated vs unvegetated) ( high in sediment compared to intertidal zone mudflat in china subsurface sediment depth (sediment) 0-20cm estuary depth (sediment) 10-20 cm southeastern china floristic province sediment surface protected area coast )2026-03-17v41 / 815pendingNo
2429gpt-5S. alterniflora vs mudflat sediment microbiomes (plant-associated vs unvegetated) ( high in sediment marsh sporobolus alterniflorus biological invasion compared to intertidal zone mudflat in china subsurface sediment depth (sediment) 0-20cm estuary depth (sediment) 10-20 cm southeastern china floristic province sediment surface protected area coast )2026-03-17v41 / 1864pendingNo
2429gpt-5Mangrove vs mudflat sediment microbiomes (vegetated vs unvegetated) ( high in intertidal zone mudflat compared to sediment in china subsurface sediment depth (sediment) 0-20cm estuary depth (sediment) 10-20 cm southeastern china floristic province sediment surface protected area coast )2026-03-17v41 / 2009pendingNo
2429gpt-5S. alterniflora vs mudflat sediment microbiomes (plant-associated vs unvegetated) ( high in intertidal zone mudflat compared to sediment marsh sporobolus alterniflorus biological invasion in china subsurface sediment depth (sediment) 0-20cm estuary depth (sediment) 10-20 cm southeastern china floristic province sediment surface protected area coast )2026-03-17v41 / 2561pendingNo

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