Experiment ID: 2419

Field Description
nameage and sex-associated variation in the multi-site microbiome of an entire social group of free-ranging rhesus macaques (7986251) - gpt-5
proj_id7986251
sraprjna692377
date_of_upload17/03/2026 09:50
doi10.1186/s40168-021-01009-w
modelgpt-5
sample_groups_version18
dbbact_id770
dbbact_linkhttps://dbbact.org/exp_info/770
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
cayo santiago0.666667
skin of penis0.400000
LOWER IN skin of penis0.285714
macaca mulatta0.222222
LOWER IN rectal swab0.222222
LOWER IN vagina0.200000
buccal mucosa0.200000
LOWER IN buccal mucosa0.181818
LOWER IN oral cavity0.166667
LOWER IN rectum0.153846
rectum0.133333
vagina0.105263
rectal swab0.100000
oral cavity0.086957
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN skin of penis1.000000
cayo santiago0.500000
skin of penis0.500000
LOWER IN rectal swab0.333333
LOWER IN vagina0.250000
LOWER IN buccal mucosa0.200000
LOWER IN oral cavity0.166667
LOWER IN rectum0.142857
buccal mucosa0.142857
macaca mulatta0.125000
rectum0.083333
vagina0.062500
rectal swab0.058824
oral cavity0.050000
Fraction of annotations for the query sequences containing the term
TermScore
provisioned diet1.000000
island1.000000
free-ranging1.000000
cayo santiago1.000000
commonwealth of puerto rico1.000000
macaca mulatta1.000000
rectum0.333333
rectal swab0.333333
external genitalia0.333333
vagina0.333333
skin of penis0.333333
buccal mucosa0.333333
oral cavity0.333333
buccal swab0.333333
LOWER IN buccal mucosa0.166667
LOWER IN oral cavity0.166667
LOWER IN buccal swab0.166667
LOWER IN external genitalia0.166667
LOWER IN vagina0.166667
LOWER IN skin of penis0.166667
LOWER IN rectum0.166667
LOWER IN rectal swab0.166667
Number of experiments associating the term to the sequence
TermScore
rectum1.000000
rectal swab1.000000
LOWER IN buccal mucosa1.000000
LOWER IN oral cavity1.000000
LOWER IN buccal swab1.000000
provisioned diet1.000000
island1.000000
free-ranging1.000000
cayo santiago1.000000
commonwealth of puerto rico1.000000
macaca mulatta1.000000
external genitalia1.000000
vagina1.000000
skin of penis1.000000
LOWER IN external genitalia1.000000
LOWER IN vagina1.000000
LOWER IN skin of penis1.000000
LOWER IN rectum1.000000
LOWER IN rectal swab1.000000
buccal mucosa1.000000
oral cavity1.000000
buccal swab1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2419gpt-5Rhesus macaque genital microbiome samples (dominant provisioned diet, island, vagina, free-ranging, cayo santiago, external genitalia, commonwealth of puerto rico, macaca mulatta, skin of penis)2026-03-17v41 / 13pendingNo
2419gpt-5Rhesus macaque rectal (gut) microbiome samples (dominant provisioned diet, island, commonwealth of puerto rico, free-ranging, cayo santiago, rectum, macaca mulatta, rectal swab)2026-03-17v41 / 16pendingNo
2419gpt-5Rhesus macaque oral (buccal) microbiome samples (dominant macaca mulatta, provisioned diet, island, buccal swab, free-ranging, buccal mucosa, cayo santiago, commonwealth of puerto rico, oral cavity)2026-03-17v41 / 22pendingNo
2419gpt-5Rhesus macaque oral (buccal) microbiome samples (common macaca mulatta, provisioned diet, island, buccal swab, free-ranging, buccal mucosa, cayo santiago, commonwealth of puerto rico, oral cavity)2026-03-17v41 / 55pendingNo
2419gpt-5Rhesus macaque genital microbiome samples (common provisioned diet, island, vagina, free-ranging, cayo santiago, external genitalia, commonwealth of puerto rico, macaca mulatta, skin of penis)2026-03-17v41 / 139pendingNo
2419gpt-5Rhesus macaque rectal (gut) microbiome samples (common provisioned diet, island, commonwealth of puerto rico, free-ranging, cayo santiago, rectum, macaca mulatta, rectal swab)2026-03-17v41 / 338pendingNo
2419gpt-5Body-site differentiation of the rhesus macaque microbiome: oral vs genital ( high in buccal mucosa oral cavity buccal swab compared to external genitalia vagina skin of penis in provisioned diet island free-ranging cayo santiago commonwealth of puerto rico macaca mulatta )2026-03-17v41 / 340pendingNo
2419gpt-5Body-site differentiation of the rhesus macaque microbiome: rectal vs oral ( high in buccal mucosa oral cavity buccal swab compared to rectum rectal swab in provisioned diet island free-ranging cayo santiago commonwealth of puerto rico macaca mulatta )2026-03-17v41 / 349pendingNo
2419gpt-5Body-site differentiation of the rhesus macaque microbiome: rectal vs genital ( high in external genitalia vagina skin of penis compared to rectum rectal swab in provisioned diet island free-ranging cayo santiago commonwealth of puerto rico macaca mulatta )2026-03-17v41 / 370pendingNo
2419gpt-5Body-site differentiation of the rhesus macaque microbiome: rectal vs genital ( high in rectum rectal swab compared to external genitalia vagina skin of penis in provisioned diet island free-ranging cayo santiago commonwealth of puerto rico macaca mulatta )2026-03-17v41 / 1202pendingNo
2419gpt-5Body-site differentiation of the rhesus macaque microbiome: oral vs genital ( high in external genitalia vagina skin of penis compared to buccal mucosa oral cavity buccal swab in provisioned diet island free-ranging cayo santiago commonwealth of puerto rico macaca mulatta )2026-03-17v41 / 1584pendingNo
2419gpt-5Body-site differentiation of the rhesus macaque microbiome: rectal vs oral ( high in rectum rectal swab compared to buccal mucosa oral cavity buccal swab in provisioned diet island free-ranging cayo santiago commonwealth of puerto rico macaca mulatta )2026-03-17v41 / 1699pendingNo

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