Experiment ID: 2414

Field Description
namethe effects of soil depth on the structure of microbial communities in agricultural soils in iowa (united states) (7851703) - gpt-5
proj_id7851703
sraprjna638682
date_of_upload17/03/2026 08:53
doi10.1128/aem.02673-20
modelgpt-5
sample_groups_version18
dbbact_id801
dbbact_linkhttps://dbbact.org/exp_info/801
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
state of iowa0.500000
subsurface0.476190
depth (soil) 45-75cm0.476190
depth (soil) 75-105cm0.450000
ames0.312500
depth 15-30cm0.312500
depth 30-60cm0.312500
depth 30-50cm0.312500
depth 40-60cm0.312500
depth (soil) 60cm0.312500
depth 50-90cm0.312500
depth (soil) 80cm0.312500
depth (soil) 60-90cm0.312500
depth (soil) 100-133cm0.312500
depth (soil) 133-166cm0.312500
depth 70-120cm0.312500
depth 100-150cm0.312500
depth 20-120cm0.312500
depth (soil) 166-200cm0.312500
depth (soil) 0-15cm0.270270
depth (soil) 15-30cm0.270270
depth (soil) 30-60cm0.270270
depth (soil) 25-50cm0.270270
depth (soil) 50cm0.270270
depth (soil) 60-100cm0.270270
LOWER IN depth (soil) 45-75cm0.266667
LOWER IN subsurface0.266667
LOWER IN depth (soil) 100-133cm0.240000
LOWER IN depth (soil) 133-166cm0.240000
LOWER IN depth 70-120cm0.240000
LOWER IN depth (soil) 166-200cm0.240000
LOWER IN depth (soil) 30-60cm0.240000
LOWER IN depth 30-50cm0.240000
LOWER IN depth (soil) 50cm0.240000
LOWER IN ames0.240000
depth (soil) 20-30cm0.238095
LOWER IN depth (soil) 60-100cm0.214286
LOWER IN depth (soil) 60cm0.214286
LOWER IN depth 50-90cm0.214286
LOWER IN depth (soil) 75-105cm0.214286
LOWER IN depth 100-150cm0.214286
LOWER IN depth (soil) 80cm0.214286
LOWER IN depth 20-120cm0.214286
LOWER IN depth (soil) 60-90cm0.214286
LOWER IN depth 30-60cm0.214286
LOWER IN depth 40-60cm0.214286
LOWER IN depth (soil) 20-30cm0.214286
LOWER IN depth (soil) 0-15cm0.214286
LOWER IN depth 15-30cm0.214286
LOWER IN depth (soil) 15-30cm0.214286
agricultural field0.200000
LOWER IN depth (soil) 25-50cm0.193548
united states of america0.006645
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN depth (soil) 100-133cm1.000000
LOWER IN depth (soil) 133-166cm1.000000
LOWER IN depth 70-120cm1.000000
LOWER IN depth (soil) 166-200cm1.000000
LOWER IN depth (soil) 30-60cm1.000000
LOWER IN depth 30-50cm1.000000
LOWER IN depth (soil) 50cm1.000000
LOWER IN ames1.000000
ames0.500000
depth 15-30cm0.500000
subsurface0.500000
LOWER IN depth (soil) 60-100cm0.500000
LOWER IN depth (soil) 60cm0.500000
LOWER IN depth 50-90cm0.500000
LOWER IN depth (soil) 75-105cm0.500000
LOWER IN depth (soil) 45-75cm0.500000
LOWER IN depth 100-150cm0.500000
LOWER IN depth (soil) 80cm0.500000
LOWER IN depth 20-120cm0.500000
LOWER IN depth (soil) 60-90cm0.500000
depth 30-60cm0.500000
depth 30-50cm0.500000
depth 40-60cm0.500000
depth (soil) 45-75cm0.500000
depth (soil) 60cm0.500000
depth 50-90cm0.500000
depth (soil) 80cm0.500000
depth (soil) 60-90cm0.500000
depth (soil) 75-105cm0.500000
LOWER IN depth 30-60cm0.500000
LOWER IN depth 40-60cm0.500000
LOWER IN depth (soil) 20-30cm0.500000
LOWER IN depth (soil) 0-15cm0.500000
LOWER IN depth 15-30cm0.500000
LOWER IN depth (soil) 15-30cm0.500000
LOWER IN subsurface0.500000
depth (soil) 100-133cm0.500000
depth (soil) 133-166cm0.500000
depth 70-120cm0.500000
depth 100-150cm0.500000
depth 20-120cm0.500000
depth (soil) 166-200cm0.500000
depth (soil) 0-15cm0.333333
depth (soil) 15-30cm0.333333
state of iowa0.333333
depth (soil) 30-60cm0.333333
depth (soil) 25-50cm0.333333
depth (soil) 50cm0.333333
depth (soil) 60-100cm0.333333
LOWER IN depth (soil) 25-50cm0.333333
depth (soil) 20-30cm0.250000
agricultural field0.111111
united states of america0.003333
Fraction of annotations for the query sequences containing the term
TermScore
agricultural field1.000000
state of iowa1.000000
soybean field1.000000
agricultural soil1.000000
united states of america1.000000
subsurface0.454545
depth (soil) 45-75cm0.454545
deep soil0.409091
depth (soil) 75-105cm0.409091
depth (soil) 20-30cm0.227273
city of kelley0.227273
depth (soil) 0-15cm0.227273
ames0.227273
depth 15-30cm0.227273
surface soil0.227273
depth (soil) 15-30cm0.227273
depth (soil) 30-60cm0.227273
depth 30-60cm0.227273
depth 30-50cm0.227273
depth (soil) 25-50cm0.227273
depth (soil) 50cm0.227273
depth 40-60cm0.227273
city of kanawha0.227273
depth (soil) 60-100cm0.227273
depth (soil) 60cm0.227273
depth 50-90cm0.227273
depth (soil) 80cm0.227273
depth (soil) 60-90cm0.227273
depth (soil) 100-133cm0.227273
depth (soil) 133-166cm0.227273
depth 70-120cm0.227273
depth 100-150cm0.227273
depth 20-120cm0.227273
depth (soil) 166-200cm0.227273
depth (soil) 1-4m0.227273
LOWER IN depth (soil) 45-75cm0.181818
LOWER IN subsurface0.181818
LOWER IN depth (soil) 100-133cm0.136364
LOWER IN depth (soil) 60-100cm0.136364
LOWER IN deep soil0.136364
LOWER IN depth (soil) 60cm0.136364
LOWER IN depth 50-90cm0.136364
LOWER IN depth (soil) 75-105cm0.136364
LOWER IN depth (soil) 133-166cm0.136364
LOWER IN depth 70-120cm0.136364
LOWER IN depth 100-150cm0.136364
LOWER IN depth (soil) 80cm0.136364
LOWER IN depth 20-120cm0.136364
LOWER IN depth (soil) 166-200cm0.136364
LOWER IN depth (soil) 1-4m0.136364
LOWER IN depth (soil) 60-90cm0.136364
LOWER IN depth (soil) 30-60cm0.136364
LOWER IN depth 30-60cm0.136364
LOWER IN depth 30-50cm0.136364
LOWER IN depth (soil) 25-50cm0.136364
LOWER IN depth (soil) 50cm0.136364
LOWER IN depth 40-60cm0.136364
LOWER IN city of kanawha0.136364
LOWER IN depth (soil) 20-30cm0.136364
LOWER IN city of kelley0.136364
LOWER IN depth (soil) 0-15cm0.136364
LOWER IN ames0.136364
LOWER IN depth 15-30cm0.136364
LOWER IN surface soil0.136364
LOWER IN depth (soil) 15-30cm0.136364
Number of experiments associating the term to the sequence
TermScore
depth (soil) 20-30cm1.000000
city of kelley1.000000
depth (soil) 0-15cm1.000000
ames1.000000
depth 15-30cm1.000000
surface soil1.000000
subsurface1.000000
depth (soil) 15-30cm1.000000
LOWER IN depth (soil) 100-133cm1.000000
LOWER IN depth (soil) 60-100cm1.000000
LOWER IN deep soil1.000000
LOWER IN depth (soil) 60cm1.000000
LOWER IN depth 50-90cm1.000000
LOWER IN depth (soil) 75-105cm1.000000
LOWER IN depth (soil) 133-166cm1.000000
LOWER IN depth 70-120cm1.000000
LOWER IN depth (soil) 45-75cm1.000000
LOWER IN depth 100-150cm1.000000
LOWER IN depth (soil) 80cm1.000000
LOWER IN depth 20-120cm1.000000
LOWER IN depth (soil) 166-200cm1.000000
LOWER IN depth (soil) 1-4m1.000000
LOWER IN depth (soil) 60-90cm1.000000
agricultural field1.000000
state of iowa1.000000
soybean field1.000000
agricultural soil1.000000
united states of america1.000000
depth (soil) 30-60cm1.000000
depth 30-60cm1.000000
depth 30-50cm1.000000
depth (soil) 25-50cm1.000000
depth (soil) 50cm1.000000
depth 40-60cm1.000000
depth (soil) 45-75cm1.000000
city of kanawha1.000000
depth (soil) 60-100cm1.000000
depth (soil) 60cm1.000000
depth 50-90cm1.000000
depth (soil) 80cm1.000000
depth (soil) 60-90cm1.000000
deep soil1.000000
depth (soil) 75-105cm1.000000
LOWER IN depth (soil) 30-60cm1.000000
LOWER IN depth 30-60cm1.000000
LOWER IN depth 30-50cm1.000000
LOWER IN depth (soil) 25-50cm1.000000
LOWER IN depth (soil) 50cm1.000000
LOWER IN depth 40-60cm1.000000
LOWER IN city of kanawha1.000000
LOWER IN depth (soil) 20-30cm1.000000
LOWER IN city of kelley1.000000
LOWER IN depth (soil) 0-15cm1.000000
LOWER IN ames1.000000
LOWER IN depth 15-30cm1.000000
LOWER IN surface soil1.000000
LOWER IN depth (soil) 15-30cm1.000000
LOWER IN subsurface1.000000
depth (soil) 100-133cm1.000000
depth (soil) 133-166cm1.000000
depth 70-120cm1.000000
depth 100-150cm1.000000
depth 20-120cm1.000000
depth (soil) 166-200cm1.000000
depth (soil) 1-4m1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2414gpt-5Upper deep vs lower deep soil layers (60–90 cm vs 90–120 cm) ( high in depth (soil) 100-133cm depth (soil) 133-166cm depth 70-120cm depth 100-150cm depth 20-120cm depth (soil) 166-200cm depth (soil) 1-4m compared to depth (soil) 60-100cm depth (soil) 60cm depth 50-90cm depth (soil) 80cm depth (soil) 45-75cm depth (soil) 60-90cm in agricultural field state of iowa deep soil soybean field agricultural soil depth (soil) 75-105cm united states of america )2026-03-17v41 / 2pendingNo
2414gpt-5Upper deep soil samples (60–90 cm) (dominant agricultural field, depth (soil) 60-100cm, state of iowa, deep soil, depth (soil) 60cm, soybean field, agricultural soil, depth 50-90cm, depth (soil) 75-105cm, depth (soil) 60-90cm, depth (soil) 80cm, depth (soil) 45-75cm, united states of america)2026-03-17v41 / 4pendingNo
2414gpt-5Surface soil samples (0–15 cm) (dominant agricultural field, state of iowa, depth (soil) 0-15cm, soybean field, agricultural soil, ames, surface soil, united states of america)2026-03-17v41 / 5pendingNo
2414gpt-5Shallow subsurface soil samples (15–30 cm) (dominant agricultural field, depth (soil) 20-30cm, state of iowa, city of kelley, soybean field, agricultural soil, depth 15-30cm, subsurface, depth (soil) 15-30cm, united states of america)2026-03-17v41 / 5pendingNo
2414gpt-5Lower deep soil samples (90–120 cm) + Very deep soil samples (120–150 cm) + Deepest soil samples (150–180 cm) (common agricultural field, depth (soil) 100-133cm, state of iowa, deep soil, soybean field, agricultural soil, depth (soil) 75-105cm, depth (soil) 133-166cm, depth 70-120cm, depth 100-150cm, depth 20-120cm, depth (soil) 166-200cm, depth (soil) 1-4m, united states of america)2026-03-17v41 / 6pendingNo
2414gpt-5Lower deep soil samples (90–120 cm) + Very deep soil samples (120–150 cm) + Deepest soil samples (150–180 cm) (dominant agricultural field, depth (soil) 100-133cm, state of iowa, deep soil, soybean field, agricultural soil, depth (soil) 75-105cm, depth (soil) 133-166cm, depth 70-120cm, depth 100-150cm, depth 20-120cm, depth (soil) 166-200cm, depth (soil) 1-4m, united states of america)2026-03-17v41 / 6pendingNo
2414gpt-5Mid-depth soil samples (30–60 cm) (dominant agricultural field, depth (soil) 30-60cm, depth 30-60cm, depth 30-50cm, depth (soil) 25-50cm, state of iowa, depth (soil) 50cm, soybean field, agricultural soil, depth 40-60cm, subsurface, depth (soil) 45-75cm, city of kanawha, united states of america)2026-03-17v41 / 7pendingNo
2414gpt-5Subsoil gradient: mid-depth (30–60 cm) vs deep composite (90–180 cm) ( high in depth (soil) 100-133cm deep soil depth (soil) 75-105cm depth (soil) 133-166cm depth 70-120cm depth 100-150cm depth 20-120cm depth (soil) 166-200cm depth (soil) 1-4m compared to depth (soil) 30-60cm depth 30-60cm depth 30-50cm depth (soil) 25-50cm depth (soil) 50cm depth 40-60cm subsurface depth (soil) 45-75cm city of kanawha in agricultural field state of iowa soybean field agricultural soil united states of america )2026-03-17v41 / 17pendingNo
2414gpt-5Shallow subsoil vs deeper subsoil (30–60 cm vs 60–90 cm) ( high in depth (soil) 60-100cm deep soil depth (soil) 60cm depth (soil) 75-105cm depth (soil) 80cm depth 50-90cm depth (soil) 60-90cm compared to depth (soil) 30-60cm depth 30-60cm depth 30-50cm depth (soil) 25-50cm depth (soil) 50cm depth 40-60cm subsurface city of kanawha in agricultural field state of iowa soybean field agricultural soil depth (soil) 45-75cm united states of america )2026-03-17v41 / 103pendingNo
2414gpt-5Shallow subsoil vs deeper subsoil (30–60 cm vs 60–90 cm) ( high in depth (soil) 30-60cm depth 30-60cm depth 30-50cm depth (soil) 25-50cm depth (soil) 50cm depth 40-60cm subsurface city of kanawha compared to depth (soil) 60-100cm deep soil depth (soil) 60cm depth (soil) 75-105cm depth (soil) 80cm depth 50-90cm depth (soil) 60-90cm in agricultural field state of iowa soybean field agricultural soil depth (soil) 45-75cm united states of america )2026-03-17v41 / 104pendingNo
2414gpt-5Shallow subsurface soil samples (15–30 cm) (common agricultural field, depth (soil) 20-30cm, state of iowa, city of kelley, soybean field, agricultural soil, depth 15-30cm, subsurface, depth (soil) 15-30cm, united states of america)2026-03-17v41 / 391pendingNo
2414gpt-5Upper deep soil samples (60–90 cm) (common agricultural field, depth (soil) 60-100cm, state of iowa, deep soil, depth (soil) 60cm, soybean field, agricultural soil, depth 50-90cm, depth (soil) 75-105cm, depth (soil) 60-90cm, depth (soil) 80cm, depth (soil) 45-75cm, united states of america)2026-03-17v41 / 453pendingNo
2414gpt-5Mid-depth soil samples (30–60 cm) (common agricultural field, depth (soil) 30-60cm, depth 30-60cm, depth 30-50cm, depth (soil) 25-50cm, state of iowa, depth (soil) 50cm, soybean field, agricultural soil, depth 40-60cm, subsurface, depth (soil) 45-75cm, city of kanawha, united states of america)2026-03-17v41 / 485pendingNo
2414gpt-5Topsoil (0–30 cm) vs deep soils (60–120 cm) ( high in depth (soil) 100-133cm depth (soil) 60-100cm deep soil depth (soil) 60cm depth 50-90cm depth (soil) 75-105cm depth (soil) 133-166cm depth 70-120cm depth (soil) 45-75cm depth 100-150cm depth (soil) 80cm depth 20-120cm depth (soil) 166-200cm depth (soil) 1-4m depth (soil) 60-90cm compared to depth (soil) 20-30cm city of kelley depth (soil) 0-15cm ames depth 15-30cm surface soil subsurface depth (soil) 15-30cm in agricultural field state of iowa soybean field agricultural soil united states of america )2026-03-17v41 / 604pendingNo
2414gpt-5Surface soil samples (0–15 cm) (common agricultural field, state of iowa, depth (soil) 0-15cm, soybean field, agricultural soil, ames, surface soil, united states of america)2026-03-17v41 / 731pendingNo
2414gpt-5Surface vs shallow subsurface soil microbiomes (0–15 cm vs 15–30 cm) ( high in depth (soil) 20-30cm city of kelley depth 15-30cm subsurface depth (soil) 15-30cm compared to surface soil ames depth (soil) 0-15cm in agricultural field state of iowa soybean field agricultural soil united states of america )2026-03-17v41 / 746pendingNo
2414gpt-5Surface vs shallow subsurface soil microbiomes (0–15 cm vs 15–30 cm) ( high in surface soil ames depth (soil) 0-15cm compared to depth (soil) 20-30cm city of kelley depth 15-30cm subsurface depth (soil) 15-30cm in agricultural field state of iowa soybean field agricultural soil united states of america )2026-03-17v41 / 1020pendingNo
2414gpt-5Topsoil vs subsoil microbial communities (0–30 cm vs 30–60 cm) ( high in depth (soil) 30-60cm depth 30-60cm depth 30-50cm depth (soil) 25-50cm depth (soil) 50cm depth 40-60cm depth (soil) 45-75cm city of kanawha compared to depth (soil) 20-30cm city of kelley depth (soil) 0-15cm ames depth 15-30cm surface soil depth (soil) 15-30cm in agricultural field state of iowa soybean field agricultural soil subsurface united states of america )2026-03-17v41 / 1345pendingNo
2414gpt-5Topsoil vs subsoil microbial communities (0–30 cm vs 30–60 cm) ( high in depth (soil) 20-30cm city of kelley depth (soil) 0-15cm ames depth 15-30cm surface soil depth (soil) 15-30cm compared to depth (soil) 30-60cm depth 30-60cm depth 30-50cm depth (soil) 25-50cm depth (soil) 50cm depth 40-60cm depth (soil) 45-75cm city of kanawha in agricultural field state of iowa soybean field agricultural soil subsurface united states of america )2026-03-17v41 / 2083pendingNo
2414gpt-5Upper deep vs lower deep soil layers (60–90 cm vs 90–120 cm) ( high in depth (soil) 60-100cm depth (soil) 60cm depth 50-90cm depth (soil) 80cm depth (soil) 45-75cm depth (soil) 60-90cm compared to depth (soil) 100-133cm depth (soil) 133-166cm depth 70-120cm depth 100-150cm depth 20-120cm depth (soil) 166-200cm depth (soil) 1-4m in agricultural field state of iowa deep soil soybean field agricultural soil depth (soil) 75-105cm united states of america )2026-03-17v41 / 3325pendingNo
2414gpt-5Subsoil gradient: mid-depth (30–60 cm) vs deep composite (90–180 cm) ( high in depth (soil) 30-60cm depth 30-60cm depth 30-50cm depth (soil) 25-50cm depth (soil) 50cm depth 40-60cm subsurface depth (soil) 45-75cm city of kanawha compared to depth (soil) 100-133cm deep soil depth (soil) 75-105cm depth (soil) 133-166cm depth 70-120cm depth 100-150cm depth 20-120cm depth (soil) 166-200cm depth (soil) 1-4m in agricultural field state of iowa soybean field agricultural soil united states of america )2026-03-17v41 / 3980pendingNo
2414gpt-5Topsoil (0–30 cm) vs deep soils (60–120 cm) ( high in depth (soil) 20-30cm city of kelley depth (soil) 0-15cm ames depth 15-30cm surface soil subsurface depth (soil) 15-30cm compared to depth (soil) 100-133cm depth (soil) 60-100cm deep soil depth (soil) 60cm depth 50-90cm depth (soil) 75-105cm depth (soil) 133-166cm depth 70-120cm depth (soil) 45-75cm depth 100-150cm depth (soil) 80cm depth 20-120cm depth (soil) 166-200cm depth (soil) 1-4m depth (soil) 60-90cm in agricultural field state of iowa soybean field agricultural soil united states of america )2026-03-17v41 / 4983pendingNo

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