Experiment ID: 2409

Field Description
namethe effect of the timing of exposure to campylobacter jejuni on the gut microbiome and inflammatory responses of broiler chickens (5948730) - gpt-5
proj_id5948730
sraprjna380214
date_of_upload17/03/2026 08:35
doi10.1186/s40168-018-0477-5
modelgpt-5
sample_groups_version18
dbbact_id379
dbbact_linkhttps://dbbact.org/exp_info/379
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
barn0.666667
broiler chicken0.200000
united kingdom0.117647
male organism0.111111
gallus gallus0.086957
caecum0.039216
LOWER IN control0.008850
control0.008811
Fraction of dbbact annotations with this term covered by the query
TermScore
barn0.500000
broiler chicken0.111111
united kingdom0.062500
male organism0.058824
gallus gallus0.045455
caecum0.020000
LOWER IN control0.004545
control0.004444
Exp. ID User ID Description Date Region Sequences Status Flag
2409gpt-5Control broiler chicken cecal samples (no Campylobacter exposure) (dominant broiler chicken, male organism, laboratory facility, loughborough, united kingdom, control, gallus gallus, ross 308 strain, caecum, unexposed to campylobacter jejuni, barn)2026-03-17v41 / 22pendingNo
2409gpt-5Campylobacter jejuni–exposed broiler chicken cecal samples (dominant broiler chicken, male organism, laboratory facility, loughborough, campylobacter jejuni colonization, infectious disease, united kingdom, gallus gallus, ross 308 strain, caecum, barn, experimental process)2026-03-17v41 / 23pendingNo
2409gpt-5Cecal microbiome of broiler chickens: Campylobacter jejuni exposure vs unexposed controls ( high in unexposed to campylobacter jejuni control compared to campylobacter jejuni colonization infectious disease experimental process in male organism broiler chicken laboratory facility loughborough united kingdom gallus gallus ross 308 strain caecum barn )2026-03-17v41 / 36pendingNo
2409gpt-5Cecal microbiome of broiler chickens: Campylobacter jejuni exposure vs unexposed controls ( high in campylobacter jejuni colonization infectious disease experimental process compared to unexposed to campylobacter jejuni control in male organism broiler chicken laboratory facility loughborough united kingdom gallus gallus ross 308 strain caecum barn )2026-03-17v41 / 57pendingNo
2409gpt-5Control broiler chicken cecal samples (no Campylobacter exposure) (common broiler chicken, male organism, laboratory facility, loughborough, united kingdom, control, gallus gallus, ross 308 strain, caecum, unexposed to campylobacter jejuni, barn)2026-03-17v41 / 136pendingNo
2409gpt-5Campylobacter jejuni–exposed broiler chicken cecal samples (common broiler chicken, male organism, laboratory facility, loughborough, campylobacter jejuni colonization, infectious disease, united kingdom, gallus gallus, ross 308 strain, caecum, barn, experimental process)2026-03-17v41 / 159pendingNo

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