Experiment ID: 2402

Field Description
namenovel microbial assemblages dominate weathered sulfide-bearing rock from copper-nickel deposits in the duluth complex, minnesota, usa (5541219) - gpt-5
proj_id5541219
srasrp103471
date_of_upload17/03/2026 08:05
doi10.1128/aem.00909-17
modelgpt-5
sample_groups_version18
dbbact_id205
dbbact_linkhttps://dbbact.org/exp_info/205
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
duluth complex0.604651
field0.564103
mine tailing0.484848
ph 4.5-70.484848
subsurface0.370370
rock0.333333
LOWER IN ph 5.5-6.50.320000
ph 7.30.320000
greenschist0.320000
LOWER IN mine tailing0.300000
LOWER IN ph 4.5-70.300000
LOWER IN ph 40.300000
ph 40.270270
LOWER IN subsurface0.260870
LOWER IN field0.260870
ph 5.5-6.50.230769
LOWER IN ph 7.30.210526
LOWER IN greenschist0.210526
LOWER IN duluth complex0.210526
state of minnesota0.200000
LOWER IN 0.187500
united states of america0.006645
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN mine tailing1.000000
LOWER IN ph 4.5-71.000000
LOWER IN ph 7.31.000000
LOWER IN greenschist1.000000
LOWER IN ph 41.000000
LOWER IN duluth complex1.000000
subsurface0.500000
field0.500000
LOWER IN ph 5.5-6.50.500000
duluth complex0.500000
mine tailing0.500000
ph 4.5-70.500000
LOWER IN subsurface0.500000
LOWER IN field0.500000
ph 7.30.500000
greenschist0.500000
ph 5.5-6.50.333333
ph 40.250000
rock0.200000
LOWER IN 0.200000
state of minnesota0.111111
united states of america0.003333
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
rock1.000000
state of minnesota1.000000
sulfide-bearing rock0.764706
duluth complex0.764706
field0.647059
laboratory facility0.529412
mine tailing0.470588
ph 4.5-70.470588
moderately acidic0.470588
weekly leachate collection0.352941
humidity cell test0.352941
kinetic test0.352941
humidity cell0.352941
weathering experiment0.352941
surface soil0.294118
experimental process0.294118
subsurface0.294118
sampling depth 0-2.5 cm0.294118
ph 40.294118
sampling depth 15 cm0.294118
LOWER IN ph 5.5-6.50.235294
LOWER IN reactor test0.235294
LOWER IN drying-rewetting cycles0.235294
ph 7.30.235294
acid-generating potential0.235294
ely greenstone0.235294
greenschist0.235294
pyrite-bearing rock0.235294
LOWER IN weekly leachate collection0.176471
LOWER IN mine tailing0.176471
LOWER IN humidity cell test0.176471
LOWER IN ph 4.5-70.176471
LOWER IN moderately acidic0.176471
reactor test0.176471
ph 5.5-6.50.176471
drying-rewetting cycles0.176471
LOWER IN surface soil0.176471
LOWER IN experimental process0.176471
LOWER IN subsurface0.176471
LOWER IN sampling depth 0-2.5 cm0.176471
LOWER IN ph 40.176471
LOWER IN sampling depth 15 cm0.176471
LOWER IN field0.176471
LOWER IN 0.176471
LOWER IN laboratory facility0.117647
LOWER IN ph 7.30.117647
LOWER IN acid-generating potential0.117647
LOWER IN ely greenstone0.117647
LOWER IN kinetic test0.117647
LOWER IN humidity cell0.117647
LOWER IN weathering experiment0.117647
LOWER IN greenschist0.117647
LOWER IN pyrite-bearing rock0.117647
LOWER IN sulfide-bearing rock0.117647
LOWER IN duluth complex0.117647
coal mine waste material0.117647
copper-nickel deposit0.117647
Number of experiments associating the term to the sequence
TermScore
surface soil1.000000
experimental process1.000000
subsurface1.000000
sampling depth 0-2.5 cm1.000000
ph 41.000000
sampling depth 15 cm1.000000
field1.000000
LOWER IN weekly leachate collection1.000000
LOWER IN ph 5.5-6.51.000000
LOWER IN reactor test1.000000
LOWER IN mine tailing1.000000
LOWER IN humidity cell test1.000000
LOWER IN laboratory facility1.000000
LOWER IN drying-rewetting cycles1.000000
LOWER IN ph 4.5-71.000000
LOWER IN moderately acidic1.000000
united states of america1.000000
sulfide-bearing rock1.000000
rock1.000000
state of minnesota1.000000
duluth complex1.000000
reactor test1.000000
ph 5.5-6.51.000000
drying-rewetting cycles1.000000
laboratory facility1.000000
LOWER IN ph 7.31.000000
LOWER IN acid-generating potential1.000000
LOWER IN ely greenstone1.000000
LOWER IN kinetic test1.000000
LOWER IN humidity cell1.000000
LOWER IN weathering experiment1.000000
LOWER IN greenschist1.000000
LOWER IN pyrite-bearing rock1.000000
weekly leachate collection1.000000
mine tailing1.000000
humidity cell test1.000000
ph 4.5-71.000000
moderately acidic1.000000
LOWER IN surface soil1.000000
LOWER IN experimental process1.000000
LOWER IN subsurface1.000000
LOWER IN sampling depth 0-2.5 cm1.000000
LOWER IN ph 41.000000
LOWER IN sampling depth 15 cm1.000000
LOWER IN field1.000000
LOWER IN 1.000000
ph 7.31.000000
acid-generating potential1.000000
ely greenstone1.000000
kinetic test1.000000
humidity cell1.000000
weathering experiment1.000000
greenschist1.000000
pyrite-bearing rock1.000000
LOWER IN sulfide-bearing rock1.000000
LOWER IN duluth complex1.000000
coal mine waste material1.000000
copper-nickel deposit1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2402gpt-5Duluth Complex weathered rock samples (16S amplicon) (common coal mine waste material, laboratory facility, united states of america, kinetic test, humidity cell, mine tailing, weathering experiment, copper-nickel deposit, rock, field, sulfide-bearing rock, state of minnesota, duluth complex, ph 4.5-7, moderately acidic)2026-03-17v41 / 6pendingNo
2402gpt-5Duluth Complex field rock pile samples (16S amplicon) (dominant surface soil, experimental process, united states of america, subsurface, sampling depth 0-2.5 cm, ph 4, sampling depth 15 cm, sulfide-bearing rock, rock, field, state of minnesota, duluth complex, )2026-03-17v41 / 9pendingNo
2402gpt-5Within Duluth Complex laboratory tests: humidity cell vs reactor ( high in mine tailing humidity cell test weekly leachate collection ph 4.5-7 moderately acidic compared to drying-rewetting cycles ph 5.5-6.5 reactor test in united states of america sulfide-bearing rock rock laboratory facility state of minnesota duluth complex )2026-03-17v41 / 9pendingNo
2402gpt-5Duluth Complex weathered rock samples (16S amplicon) (dominant coal mine waste material, laboratory facility, united states of america, kinetic test, humidity cell, mine tailing, weathering experiment, copper-nickel deposit, rock, field, sulfide-bearing rock, state of minnesota, duluth complex, ph 4.5-7, moderately acidic)2026-03-17v41 / 13pendingNo
2402gpt-5Duluth Complex humidity cell samples (16S amplicon) (dominant united states of america, mine tailing, humidity cell test, sulfide-bearing rock, rock, laboratory facility, weekly leachate collection, state of minnesota, duluth complex, ph 4.5-7, moderately acidic)2026-03-17v41 / 13pendingNo
2402gpt-5Ely Greenstone weathered rock samples (16S amplicon) (dominant ph 7.3, united states of america, acid-generating potential, ely greenstone, kinetic test, humidity cell, weathering experiment, rock, field, greenschist, pyrite-bearing rock, state of minnesota)2026-03-17v41 / 26pendingNo
2402gpt-5Ely Greenstone weathered rock samples (16S amplicon) (common ph 7.3, united states of america, acid-generating potential, ely greenstone, kinetic test, humidity cell, weathering experiment, rock, field, greenschist, pyrite-bearing rock, state of minnesota)2026-03-17v41 / 52pendingNo
2402gpt-5Duluth Complex humidity cell samples (16S amplicon) (common united states of america, mine tailing, humidity cell test, sulfide-bearing rock, rock, laboratory facility, weekly leachate collection, state of minnesota, duluth complex, ph 4.5-7, moderately acidic)2026-03-17v41 / 54pendingNo
2402gpt-5Duluth Complex laboratory weathering (combined) vs Ely Greenstone weathered rock ( high in weekly leachate collection reactor test ph 5.5-6.5 mine tailing humidity cell test sulfide-bearing rock laboratory facility drying-rewetting cycles duluth complex ph 4.5-7 moderately acidic compared to ph 7.3 acid-generating potential ely greenstone kinetic test humidity cell weathering experiment field greenschist pyrite-bearing rock in state of minnesota united states of america rock )2026-03-17v41 / 61pendingNo
2402gpt-5Duluth Complex field rock pile samples (16S amplicon) (common surface soil, experimental process, united states of america, subsurface, sampling depth 0-2.5 cm, ph 4, sampling depth 15 cm, sulfide-bearing rock, rock, field, state of minnesota, duluth complex, )2026-03-17v41 / 72pendingNo
2402gpt-5Duluth Complex laboratory weathering (combined) vs Ely Greenstone weathered rock ( high in ph 7.3 acid-generating potential ely greenstone kinetic test humidity cell weathering experiment field greenschist pyrite-bearing rock compared to weekly leachate collection reactor test ph 5.5-6.5 mine tailing humidity cell test sulfide-bearing rock laboratory facility drying-rewetting cycles duluth complex ph 4.5-7 moderately acidic in state of minnesota united states of america rock )2026-03-17v41 / 106pendingNo
2402gpt-5Field context comparison: Duluth Complex field rock pile vs Ely Greenstone weathered rock ( high in ph 7.3 acid-generating potential ely greenstone kinetic test humidity cell weathering experiment greenschist pyrite-bearing rock compared to surface soil experimental process subsurface sampling depth 0-2.5 cm ph 4 sampling depth 15 cm sulfide-bearing rock duluth complex in state of minnesota united states of america rock field )2026-03-17v41 / 146pendingNo
2402gpt-5Duluth Complex: controlled humidity cell tests vs all other Duluth weathering contexts ( high in mine tailing humidity cell test weekly leachate collection ph 4.5-7 moderately acidic compared to surface soil experimental process subsurface sampling depth 0-2.5 cm reactor test ph 4 ph 5.5-6.5 sampling depth 15 cm field drying-rewetting cycles in united states of america sulfide-bearing rock rock laboratory facility state of minnesota duluth complex )2026-03-17v41 / 198pendingNo
2402gpt-5Within Duluth Complex: laboratory weathering mode (humidity cell + reactor) vs field rock pile ( high in weekly leachate collection ph 5.5-6.5 reactor test mine tailing humidity cell test laboratory facility drying-rewetting cycles ph 4.5-7 moderately acidic compared to surface soil experimental process subsurface sampling depth 0-2.5 cm ph 4 sampling depth 15 cm field in united states of america sulfide-bearing rock rock state of minnesota duluth complex )2026-03-17v41 / 227pendingNo
2402gpt-5Field context comparison: Duluth Complex field rock pile vs Ely Greenstone weathered rock ( high in surface soil experimental process subsurface sampling depth 0-2.5 cm ph 4 sampling depth 15 cm sulfide-bearing rock duluth complex compared to ph 7.3 acid-generating potential ely greenstone kinetic test humidity cell weathering experiment greenschist pyrite-bearing rock in state of minnesota united states of america rock field )2026-03-17v41 / 293pendingNo
2402gpt-5Duluth Complex: controlled humidity cell tests vs all other Duluth weathering contexts ( high in surface soil experimental process subsurface sampling depth 0-2.5 cm reactor test ph 4 ph 5.5-6.5 sampling depth 15 cm field drying-rewetting cycles compared to mine tailing humidity cell test weekly leachate collection ph 4.5-7 moderately acidic in united states of america sulfide-bearing rock rock laboratory facility state of minnesota duluth complex )2026-03-17v41 / 539pendingNo
2402gpt-5Within Duluth Complex: laboratory weathering mode (humidity cell + reactor) vs field rock pile ( high in surface soil experimental process subsurface sampling depth 0-2.5 cm ph 4 sampling depth 15 cm field compared to weekly leachate collection ph 5.5-6.5 reactor test mine tailing humidity cell test laboratory facility drying-rewetting cycles ph 4.5-7 moderately acidic in united states of america sulfide-bearing rock rock state of minnesota duluth complex )2026-03-17v41 / 1067pendingNo

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