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Experiment ID: 236

Field	Description
name	microbial communities in sediment from zostera marina patches, but not the z. marina leaf or root microbiomes, vary in relation to distance from patch edge
sra	srp092613
sra	prjna350006
datamd5	72a0eece46b507bd69c9ac15fe5f71f8
mapmd5	0636a968d92e9f19193f329386bfddc2

Annotations for experiment:

term enrichment score

Term	Score
bodega bay	0.489796
zostera marina	0.323529
marine eelgrass	0.323529
LOWER IN leaf	0.076923
LOWER IN sediment	0.076923
LOWER IN marine sediment	0.076923
LOWER IN root	0.072727
ocean	0.062338
root	0.062016
mitochondrion	0.050000
marine sediment	0.048387
leaf	0.042254
pacific ocean	0.042105
sediment	0.031579
state of california	0.030265
sea water	0.021858
water	0.017316

Fraction of dbbact annotations with this term covered by the query

Term	Score
bodega bay	0.333333
zostera marina	0.200000
marine eelgrass	0.200000
LOWER IN leaf	0.076923
LOWER IN sediment	0.076923
LOWER IN marine sediment	0.076923
LOWER IN root	0.047619
mitochondrion	0.037037
root	0.034483
ocean	0.032258
marine sediment	0.027027
pacific ocean	0.024390
leaf	0.023256
sediment	0.016949
state of california	0.015385
sea water	0.011765
water	0.009174

Fraction of annotations for the query sequences containing the term

Term	Score
state of california	0.923077
bodega bay	0.923077
ocean	0.923077
zostera marina	0.846154
marine eelgrass	0.846154
root	0.307692
sediment	0.230769
marine sediment	0.230769
leaf	0.230769
LOWER IN root	0.153846
pacific ocean	0.153846
water	0.153846
sea water	0.153846
LOWER IN leaf	0.076923
LOWER IN sediment	0.076923
LOWER IN marine sediment	0.076923
mitochondrion	0.076923

Number of experiments associating the term to the sequence

Term	Score
state of california	1.000000
bodega bay	1.000000
ocean	1.000000
zostera marina	1.000000
marine eelgrass	1.000000
sediment	1.000000
marine sediment	1.000000
LOWER IN root	1.000000
pacific ocean	1.000000
water	1.000000
sea water	1.000000
LOWER IN leaf	1.000000
root	1.000000
LOWER IN sediment	1.000000
LOWER IN marine sediment	1.000000
leaf	1.000000
mitochondrion	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
236	amnon	marine eelgrass mitochondria (other zostera marina, mitochondrion, marine eelgrass)	2017-11-07	v4	1 / 1	approved	No
236	amnon	dominant state of california, bodega bay, ocean, zostera marina, marine eelgrass, leaf	2017-11-07	v4	1 / 4	approved	No
236	amnon	dominant state of california, bodega bay, ocean, zostera marina, marine eelgrass, sediment, marine sediment	2017-11-07	v4	1 / 5	approved	No
236	amnon	dominant state of california, bodega bay, ocean, zostera marina, marine eelgrass, root	2017-11-07	v4	1 / 8	approved	No
236	amnon	dominant ocean, pacific ocean, state of california, bodega bay, water, sea water	2017-11-07	v4	1 / 21	approved	No
236	amnon	high in leaf compared to root in state of california bodega bay ocean zostera marina marine eelgrass	2017-11-07	v4	1 / 287	approved	No
236	amnon	common state of california, bodega bay, ocean, zostera marina, marine eelgrass, root	2017-11-07	v4	1 / 483	approved	No
236	amnon	common state of california, bodega bay, ocean, zostera marina, marine eelgrass, leaf	2017-11-07	v4	1 / 505	approved	No
236	amnon	high in root compared to sediment marine sediment in state of california bodega bay ocean zostera marina marine eelgrass	2017-11-07	v4	1 / 674	approved	No
236	amnon	high in root compared to leaf in state of california bodega bay ocean zostera marina marine eelgrass	2017-11-07	v4	1 / 819	approved	No
236	amnon	common ocean, state of california, pacific ocean, bodega bay, water, sea water	2017-11-07	v4	1 / 1156	approved	No
236	amnon	common state of california, bodega bay, ocean, zostera marina, marine eelgrass, sediment, marine sediment	2017-11-07	v4	1 / 1904	approved	No
236	amnon	high in sediment marine sediment compared to root in state of california bodega bay ocean zostera marina marine eelgrass	2017-11-07	v4	1 / 2745	approved	No

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