Experiment ID: 2358

Field Description
namealterations of gastric mucosal microbiota across different stomach microhabitats in a cohort of 276 patients with gastric cancer (6412016) - gpt-5
proj_id6412016
srasrp128749
date_of_upload05/03/2026 15:36
doi10.1016/j.ebiom.2018.12.034
modelgpt-5
sample_groups_version18
dbbact_id520
dbbact_linkhttps://dbbact.org/exp_info/520
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
mucosa of stomach0.666667
hangzhou city prefecture0.500000
helicobacter pylori infectious disease0.500000
human middle aged stage0.400000
zhejiang province0.181818
hospital0.181818
stomach0.111111
china0.009390
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
mucosa of stomach0.500000
hangzhou city prefecture0.333333
helicobacter pylori infectious disease0.333333
human middle aged stage0.250000
zhejiang province0.100000
hospital0.100000
stomach0.058824
china0.004717
homo sapiens0.002591
Exp. ID User ID Description Date Region Sequences Status Flag
2358gpt-5Tumoral gastric mucosal samples (16S amplicon, human, China) (dominant stomach cancer, zhejiang province, stomach, human middle aged stage, hospital, mucosa of stomach, hangzhou city prefecture, surgical resection tissue, gastrectomy, homo sapiens, china, tumoral microhabitat, helicobacter pylori infectious disease)2026-03-05v31 / 9pendingNo
2358gpt-5Peritumoral gastric mucosal samples (16S amplicon, human, China) + Normal gastric mucosal samples (16S amplicon, human, China) (dominant stomach cancer, zhejiang province, stomach, human middle aged stage, hospital, mucosa of stomach, surgical resection tissue, hangzhou city prefecture, gastrectomy, homo sapiens, normal microhabitat, china, peritumoral microhabitat, adjacent tissue 2-5 cm, helicobacter pylori infectious disease)2026-03-05v31 / 11pendingNo
2358gpt-5Tumoral gastric mucosal samples (16S amplicon, human, China) (common stomach cancer, zhejiang province, stomach, human middle aged stage, hospital, mucosa of stomach, hangzhou city prefecture, surgical resection tissue, gastrectomy, homo sapiens, china, tumoral microhabitat, helicobacter pylori infectious disease)2026-03-05v31 / 24pendingNo
2358gpt-5Peritumoral gastric mucosal samples (16S amplicon, human, China) + Normal gastric mucosal samples (16S amplicon, human, China) (common stomach cancer, zhejiang province, stomach, human middle aged stage, hospital, mucosa of stomach, surgical resection tissue, hangzhou city prefecture, gastrectomy, homo sapiens, normal microhabitat, china, peritumoral microhabitat, adjacent tissue 2-5 cm, helicobacter pylori infectious disease)2026-03-05v31 / 29pendingNo
2358gpt-5Tumoral vs normal gastric mucosal microbiome (cancer-associated shifts) ( high in tumoral microhabitat compared to adjacent tissue 2-5 cm normal microhabitat peritumoral microhabitat in stomach cancer zhejiang province stomach human middle aged stage hospital mucosa of stomach surgical resection tissue hangzhou city prefecture gastrectomy homo sapiens china helicobacter pylori infectious disease )2026-03-05v31 / 371pendingNo
2358gpt-5Tumoral vs normal gastric mucosal microbiome (cancer-associated shifts) ( high in adjacent tissue 2-5 cm normal microhabitat peritumoral microhabitat compared to tumoral microhabitat in stomach cancer zhejiang province stomach human middle aged stage hospital mucosa of stomach surgical resection tissue hangzhou city prefecture gastrectomy homo sapiens china helicobacter pylori infectious disease )2026-03-05v31 / 1134pendingNo

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