Experiment ID: 2355

Field Description
namesalt marsh sediment bacterial communities maintain original population structure after transplantation across a latitudinal gradient (5935077) - gpt-5
proj_id5935077
sraprjna384656
date_of_upload05/03/2026 07:56
doi10.7717/peerj.4735
modelgpt-5
sample_groups_version18
dbbact_id376
dbbact_linkhttps://dbbact.org/exp_info/376
needs_manual_reviewtrue

Annotations for experiment:

Fraction of annotations for the query sequences containing the term
TermScore
rhizosphere1.000000
marine sediment1.000000
wetland ecosystem1.000000
sediment1.000000
saline marsh1.000000
sediment surface1.000000
united states of america1.000000
marine salt marsh biome1.000000
depth (sediment) 0-20cm1.000000
southern site0.500000
state of south carolina0.333333
town of beaufort0.333333
ashepoo combahee edisto basin national estuarine research reserve0.333333
protected area0.333333
state of north carolina0.333333
bennett's point0.333333
commonwealth of massachusetts0.277778
east falmouth0.277778
town of portsmouth0.277778
waquoit bay0.277778
prudence island0.277778
state of rhode island0.277778
state of delaware0.277778
saint jones reserve, delaware national estuarine research reserve0.277778
dover0.277778
low salinity0.277778
saint jones river0.277778
LOWER IN state of south carolina0.222222
LOWER IN town of beaufort0.222222
LOWER IN ashepoo combahee edisto basin national estuarine research reserve0.222222
LOWER IN protected area0.222222
LOWER IN state of north carolina0.222222
LOWER IN bennett's point0.222222
LOWER IN southern site0.166667
LOWER IN state of delaware0.166667
LOWER IN saint jones reserve, delaware national estuarine research reserve0.166667
LOWER IN low salinity0.166667
LOWER IN dover0.166667
LOWER IN saint jones river0.166667
LOWER IN commonwealth of massachusetts0.166667
LOWER IN east falmouth0.166667
LOWER IN town of portsmouth0.166667
LOWER IN waquoit bay0.166667
LOWER IN prudence island0.166667
LOWER IN state of rhode island0.166667
Number of experiments associating the term to the sequence
TermScore
commonwealth of massachusetts1.000000
east falmouth1.000000
town of portsmouth1.000000
waquoit bay1.000000
prudence island1.000000
state of rhode island1.000000
LOWER IN state of south carolina1.000000
LOWER IN town of beaufort1.000000
LOWER IN ashepoo combahee edisto basin national estuarine research reserve1.000000
LOWER IN protected area1.000000
LOWER IN state of north carolina1.000000
LOWER IN southern site1.000000
LOWER IN bennett's point1.000000
rhizosphere1.000000
marine sediment1.000000
wetland ecosystem1.000000
sediment1.000000
saline marsh1.000000
sediment surface1.000000
united states of america1.000000
marine salt marsh biome1.000000
depth (sediment) 0-20cm1.000000
LOWER IN state of delaware1.000000
LOWER IN saint jones reserve, delaware national estuarine research reserve1.000000
LOWER IN low salinity1.000000
LOWER IN dover1.000000
LOWER IN saint jones river1.000000
state of delaware1.000000
saint jones reserve, delaware national estuarine research reserve1.000000
dover1.000000
low salinity1.000000
saint jones river1.000000
LOWER IN commonwealth of massachusetts1.000000
LOWER IN east falmouth1.000000
LOWER IN town of portsmouth1.000000
LOWER IN waquoit bay1.000000
LOWER IN prudence island1.000000
LOWER IN state of rhode island1.000000
state of south carolina1.000000
town of beaufort1.000000
ashepoo combahee edisto basin national estuarine research reserve1.000000
protected area1.000000
state of north carolina1.000000
southern site1.000000
bennett's point1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2355gpt-5Waquoit Bay (Massachusetts) salt marsh sediment samples + Prudence Island (Rhode Island) salt marsh sediment samples (dominant commonwealth of massachusetts, east falmouth, town of portsmouth, waquoit bay, rhizosphere, marine sediment, prudence island, wetland ecosystem, sediment, saline marsh, united states of america, sediment surface, state of rhode island, marine salt marsh biome, depth (sediment) 0-20cm)2026-03-05v41 / 4pendingNo
2355gpt-5North Carolina vs South Carolina salt marsh sediments ( high in town of beaufort protected area state of north carolina compared to bennett's point state of south carolina ashepoo combahee edisto basin national estuarine research reserve in southern site rhizosphere wetland ecosystem marine sediment sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 6pendingNo
2355gpt-5ACE Basin (South Carolina) salt marsh sediment samples (dominant state of south carolina, ashepoo combahee edisto basin national estuarine research reserve, rhizosphere, marine sediment, wetland ecosystem, southern site, sediment, saline marsh, united states of america, sediment surface, bennett's point, marine salt marsh biome, depth (sediment) 0-20cm)2026-03-05v41 / 8pendingNo
2355gpt-5North Carolina vs South Carolina salt marsh sediments ( high in bennett's point state of south carolina ashepoo combahee edisto basin national estuarine research reserve compared to town of beaufort protected area state of north carolina in southern site rhizosphere wetland ecosystem marine sediment sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 9pendingNo
2355gpt-5Rachel Carson Reserve (North Carolina) salt marsh sediment samples (dominant town of beaufort, protected area, marine sediment, wetland ecosystem, state of north carolina, rhizosphere, southern site, sediment, saline marsh, united states of america, sediment surface, marine salt marsh biome, depth (sediment) 0-20cm)2026-03-05v41 / 13pendingNo
2355gpt-5St. Jones Reserve (Delaware) salt marsh sediment samples (dominant state of delaware, saint jones reserve, delaware national estuarine research reserve, marine sediment, wetland ecosystem, dover, low salinity, rhizosphere, sediment, saline marsh, united states of america, sediment surface, marine salt marsh biome, saint jones river, depth (sediment) 0-20cm)2026-03-05v41 / 16pendingNo
2355gpt-5New England (MA + RI) vs Southeast (NC + SC) marsh sediments ( high in state of south carolina town of beaufort ashepoo combahee edisto basin national estuarine research reserve protected area state of north carolina southern site bennett's point compared to commonwealth of massachusetts east falmouth town of portsmouth waquoit bay prudence island state of rhode island in rhizosphere marine sediment wetland ecosystem sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 96pendingNo
2355gpt-5Northern vs southern U.S. Atlantic salt marsh sediments ( high in state of south carolina town of beaufort ashepoo combahee edisto basin national estuarine research reserve protected area state of north carolina southern site bennett's point compared to commonwealth of massachusetts east falmouth state of delaware town of portsmouth waquoit bay saint jones reserve, delaware national estuarine research reserve prudence island dover low salinity state of rhode island saint jones river in rhizosphere marine sediment wetland ecosystem sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 151pendingNo
2355gpt-5St. Jones Reserve (Delaware) salt marsh sediment samples (common state of delaware, saint jones reserve, delaware national estuarine research reserve, marine sediment, wetland ecosystem, dover, low salinity, rhizosphere, sediment, saline marsh, united states of america, sediment surface, marine salt marsh biome, saint jones river, depth (sediment) 0-20cm)2026-03-05v41 / 161pendingNo
2355gpt-5Rachel Carson Reserve (North Carolina) salt marsh sediment samples (common town of beaufort, protected area, marine sediment, wetland ecosystem, state of north carolina, rhizosphere, southern site, sediment, saline marsh, united states of america, sediment surface, marine salt marsh biome, depth (sediment) 0-20cm)2026-03-05v41 / 163pendingNo
2355gpt-5ACE Basin (South Carolina) salt marsh sediment samples (common state of south carolina, ashepoo combahee edisto basin national estuarine research reserve, rhizosphere, marine sediment, wetland ecosystem, southern site, sediment, saline marsh, united states of america, sediment surface, bennett's point, marine salt marsh biome, depth (sediment) 0-20cm)2026-03-05v41 / 174pendingNo
2355gpt-5Delaware vs Carolina salt marsh sediments ( high in state of south carolina town of beaufort ashepoo combahee edisto basin national estuarine research reserve protected area state of north carolina southern site bennett's point compared to state of delaware saint jones reserve, delaware national estuarine research reserve low salinity dover saint jones river in rhizosphere marine sediment wetland ecosystem sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 364pendingNo
2355gpt-5Mid-Atlantic (Delaware) vs New England (Massachusetts + Rhode Island) marsh sediments ( high in state of delaware saint jones reserve, delaware national estuarine research reserve low salinity dover saint jones river compared to commonwealth of massachusetts east falmouth town of portsmouth waquoit bay prudence island state of rhode island in rhizosphere marine sediment wetland ecosystem sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 397pendingNo
2355gpt-5Waquoit Bay (Massachusetts) salt marsh sediment samples + Prudence Island (Rhode Island) salt marsh sediment samples (common commonwealth of massachusetts, east falmouth, town of portsmouth, waquoit bay, rhizosphere, marine sediment, prudence island, wetland ecosystem, sediment, saline marsh, united states of america, sediment surface, state of rhode island, marine salt marsh biome, depth (sediment) 0-20cm)2026-03-05v41 / 400pendingNo
2355gpt-5Delaware vs Carolina salt marsh sediments ( high in state of delaware saint jones reserve, delaware national estuarine research reserve low salinity dover saint jones river compared to state of south carolina town of beaufort ashepoo combahee edisto basin national estuarine research reserve protected area state of north carolina southern site bennett's point in rhizosphere marine sediment wetland ecosystem sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 494pendingNo
2355gpt-5Northern vs southern U.S. Atlantic salt marsh sediments ( high in commonwealth of massachusetts east falmouth state of delaware town of portsmouth waquoit bay saint jones reserve, delaware national estuarine research reserve prudence island dover low salinity state of rhode island saint jones river compared to state of south carolina town of beaufort ashepoo combahee edisto basin national estuarine research reserve protected area state of north carolina southern site bennett's point in rhizosphere marine sediment wetland ecosystem sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 795pendingNo
2355gpt-5Mid-Atlantic (Delaware) vs New England (Massachusetts + Rhode Island) marsh sediments ( high in commonwealth of massachusetts east falmouth town of portsmouth waquoit bay prudence island state of rhode island compared to state of delaware saint jones reserve, delaware national estuarine research reserve low salinity dover saint jones river in rhizosphere marine sediment wetland ecosystem sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 1293pendingNo
2355gpt-5New England (MA + RI) vs Southeast (NC + SC) marsh sediments ( high in commonwealth of massachusetts east falmouth town of portsmouth waquoit bay prudence island state of rhode island compared to state of south carolina town of beaufort ashepoo combahee edisto basin national estuarine research reserve protected area state of north carolina southern site bennett's point in rhizosphere marine sediment wetland ecosystem sediment saline marsh sediment surface united states of america marine salt marsh biome depth (sediment) 0-20cm )2026-03-05v41 / 1681pendingNo

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