Experiment ID: 2346

Field Description
nameinfluence of whole-wheat consumption on fecal microbial community structure of obese diabetic mice (4768707) - gpt-5
proj_id4768707
sraprjna281761
date_of_upload05/03/2026 06:25
doi10.7717/peerj.1702
modelgpt-5
sample_groups_version18
dbbact_id39
dbbact_linkhttps://dbbact.org/exp_info/39
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
db/db mouse0.571429
diabetes mellitus0.444444
ain-93g rodent diet0.400000
wheat0.285714
LOWER IN wheat0.250000
LOWER IN ain-93g rodent diet0.250000
LOWER IN obesity0.250000
LOWER IN db/db mouse0.250000
LOWER IN diet0.222222
LOWER IN diabetes mellitus0.222222
obesity0.126984
male organism0.111111
diet0.074074
mus musculus0.027027
LOWER IN control0.008850
control0.008830
united states of america0.006645
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
db/db mouse0.500000
ain-93g rodent diet0.500000
LOWER IN wheat0.500000
LOWER IN ain-93g rodent diet0.500000
LOWER IN db/db mouse0.500000
diabetes mellitus0.333333
LOWER IN diet0.333333
LOWER IN diabetes mellitus0.333333
wheat0.250000
LOWER IN obesity0.200000
obesity0.066667
male organism0.058824
diet0.041667
mus musculus0.013699
LOWER IN control0.004545
control0.004444
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
obesity1.333333
united states of america1.000000
male organism1.000000
feces1.000000
pullman1.000000
laboratory facility1.000000
mus musculus1.000000
diabetic phenotype0.666667
diabetes mellitus0.666667
db/db mouse0.666667
control0.666667
diet0.333333
8-week feeding0.333333
wheat0.333333
ain-93g rodent diet0.333333
lean phenotype0.333333
bks.cg-dock7m +/+ lepr db strain0.333333
LOWER IN obesity0.333333
LOWER IN diet0.166667
LOWER IN 8-week feeding0.166667
LOWER IN wheat0.166667
LOWER IN control0.166667
LOWER IN bks.cg-dock7m +/+ lepr db strain0.166667
LOWER IN lean phenotype0.166667
LOWER IN ain-93g rodent diet0.166667
LOWER IN diabetic phenotype0.166667
LOWER IN diabetes mellitus0.166667
LOWER IN db/db mouse0.166667
Number of experiments associating the term to the sequence
TermScore
united states of america1.000000
male organism1.000000
diet1.000000
8-week feeding1.000000
diabetic phenotype1.000000
obesity1.000000
diabetes mellitus1.000000
feces1.000000
pullman1.000000
laboratory facility1.000000
db/db mouse1.000000
mus musculus1.000000
wheat1.000000
ain-93g rodent diet1.000000
control1.000000
lean phenotype1.000000
bks.cg-dock7m +/+ lepr db strain1.000000
LOWER IN diet1.000000
LOWER IN 8-week feeding1.000000
LOWER IN wheat1.000000
LOWER IN control1.000000
LOWER IN bks.cg-dock7m +/+ lepr db strain1.000000
LOWER IN lean phenotype1.000000
LOWER IN ain-93g rodent diet1.000000
LOWER IN diabetic phenotype1.000000
LOWER IN obesity1.000000
LOWER IN diabetes mellitus1.000000
LOWER IN db/db mouse1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2346gpt-5Whole-wheat supplemented obese mouse fecal samples (dominant united states of america, male organism, diet, 8-week feeding, diabetic phenotype, obesity, diabetes mellitus, feces, pullman, obesity, laboratory facility, db/db mouse, mus musculus, wheat)2026-03-05v41 / 16pendingNo
2346gpt-5Lean mouse fecal samples (dominant united states of america, lean phenotype, feces, pullman, laboratory facility, bks.cg-dock7m +/+ lepr db strain, control, mus musculus, male organism)2026-03-05v41 / 17pendingNo
2346gpt-5Obese control mouse fecal samples (dominant united states of america, diabetic phenotype, obesity, diabetes mellitus, feces, pullman, obesity, laboratory facility, db/db mouse, ain-93g rodent diet, control, mus musculus, male organism)2026-03-05v41 / 20pendingNo
2346gpt-5Obesity-associated microbiome: Obese vs Lean mice (fecal, amplicon) ( high in bks.cg-dock7m +/+ lepr db strain lean phenotype compared to diabetic phenotype obesity diabetes mellitus obesity db/db mouse ain-93g rodent diet in united states of america feces pullman laboratory facility male organism control mus musculus )2026-03-05v41 / 22pendingNo
2346gpt-5Whole-wheat–supplemented obese vs lean baseline (restoration toward lean-like profile) ( high in control bks.cg-dock7m +/+ lepr db strain lean phenotype compared to diet 8-week feeding diabetic phenotype obesity diabetes mellitus obesity db/db mouse wheat in united states of america feces pullman laboratory facility male organism mus musculus )2026-03-05v41 / 36pendingNo
2346gpt-5Effect of whole-wheat supplementation in obese mice (diet intervention effect) ( high in diet 8-week feeding wheat compared to control ain-93g rodent diet in united states of america diabetic phenotype obesity diabetes mellitus feces pullman obesity laboratory facility db/db mouse male organism mus musculus )2026-03-05v41 / 72pendingNo
2346gpt-5Obesity-associated microbiome: Obese vs Lean mice (fecal, amplicon) ( high in diabetic phenotype obesity diabetes mellitus obesity db/db mouse ain-93g rodent diet compared to bks.cg-dock7m +/+ lepr db strain lean phenotype in united states of america feces pullman laboratory facility male organism control mus musculus )2026-03-05v41 / 79pendingNo
2346gpt-5Whole-wheat–supplemented obese vs lean baseline (restoration toward lean-like profile) ( high in diet 8-week feeding diabetic phenotype obesity diabetes mellitus obesity db/db mouse wheat compared to control bks.cg-dock7m +/+ lepr db strain lean phenotype in united states of america feces pullman laboratory facility male organism mus musculus )2026-03-05v41 / 87pendingNo
2346gpt-5Effect of whole-wheat supplementation in obese mice (diet intervention effect) ( high in control ain-93g rodent diet compared to diet 8-week feeding wheat in united states of america diabetic phenotype obesity diabetes mellitus feces pullman obesity laboratory facility db/db mouse male organism mus musculus )2026-03-05v41 / 90pendingNo
2346gpt-5Lean mouse fecal samples (common united states of america, lean phenotype, feces, pullman, laboratory facility, bks.cg-dock7m +/+ lepr db strain, control, mus musculus, male organism)2026-03-05v41 / 131pendingNo
2346gpt-5Obese control mouse fecal samples (common united states of america, diabetic phenotype, obesity, diabetes mellitus, feces, pullman, obesity, laboratory facility, db/db mouse, ain-93g rodent diet, control, mus musculus, male organism)2026-03-05v41 / 160pendingNo
2346gpt-5Whole-wheat supplemented obese mouse fecal samples (common united states of america, male organism, diet, 8-week feeding, diabetic phenotype, obesity, diabetes mellitus, feces, pullman, obesity, laboratory facility, db/db mouse, mus musculus, wheat)2026-03-05v41 / 179pendingNo

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