Experiment ID: 2342

Field Description
namethe fecal, oral, and skin microbiota of children with chagas disease treated with benznidazole (6391005) - gpt-5
proj_id6391005
sraerp113722
date_of_upload05/03/2026 06:08
doi10.1371/journal.pone.0212593
modelgpt-5
sample_groups_version18
dbbact_id517
dbbact_linkhttps://dbbact.org/exp_info/517
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
children0.500000
chagas disease0.473684
skin of body0.277778
bolivia0.250000
child stage0.166667
6-12 year-old child stage0.090909
oral cavity0.047904
child0.016129
control0.004444
homo sapiens0.002591
feces0.002282
Fraction of dbbact annotations with this term covered by the query
TermScore
children0.333333
chagas disease0.333333
skin of body0.200000
bolivia0.142857
child stage0.090909
6-12 year-old child stage0.047619
oral cavity0.025641
child0.008130
control0.002227
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
6-12 year-old child stage1.000000
bolivia1.000000
children1.000000
homo sapiens1.000000
child1.000000
control1.000000
child stage1.000000
municipality of tarabuco1.000000
post-treatment0.818182
chagas disease0.818182
benznidazole0.818182
pre-treatment0.545455
skin of body0.454545
volar forearm0.454545
oral cavity0.363636
feces0.181818
LOWER IN pre-treatment0.090909
Number of experiments associating the term to the sequence
TermScore
6-12 year-old child stage1.000000
bolivia1.000000
post-treatment1.000000
children1.000000
homo sapiens1.000000
oral cavity1.000000
child1.000000
control1.000000
child stage1.000000
municipality of tarabuco1.000000
skin of body1.000000
chagas disease1.000000
benznidazole1.000000
volar forearm1.000000
pre-treatment1.000000
feces1.000000
LOWER IN pre-treatment1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2342gpt-5Control children oral samples (post-treatment timepoint) (dominant 6-12 year-old child stage, bolivia, post-treatment, children, homo sapiens, oral cavity, child, control, child stage, municipality of tarabuco)2026-03-05v41 / 7pendingNo
2342gpt-5Chagas-positive children oral samples (post-treatment) + Control children oral samples (pre-treatment timepoint) + Chagas-positive children oral samples (pre-treatment) (dominant 6-12 year-old child stage, bolivia, pre-treatment, post-treatment, homo sapiens, oral cavity, child, control, child stage, benznidazole, chagas disease, municipality of tarabuco, children)2026-03-05v41 / 10pendingNo
2342gpt-5Control children skin samples (post-treatment timepoint) + Chagas-positive children skin samples (post-treatment) (dominant 6-12 year-old child stage, bolivia, post-treatment, skin of body, homo sapiens, child, control, child stage, chagas disease, benznidazole, municipality of tarabuco, volar forearm, children)2026-03-05v41 / 13pendingNo
2342gpt-5Control children fecal samples (pre-treatment timepoint) + Chagas-positive children fecal samples (pre-treatment) + Chagas-positive children fecal samples (post-treatment) + Control children fecal samples (post-treatment timepoint) (dominant 6-12 year-old child stage, bolivia, pre-treatment, post-treatment, homo sapiens, child, control, child stage, benznidazole, chagas disease, municipality of tarabuco, feces, children)2026-03-05v41 / 16pendingNo
2342gpt-5Chagas-positive children skin samples (pre-treatment) + Control children skin samples (pre-treatment timepoint) (dominant 6-12 year-old child stage, bolivia, pre-treatment, skin of body, homo sapiens, child, control, child stage, chagas disease, benznidazole, municipality of tarabuco, volar forearm, children)2026-03-05v41 / 16pendingNo
2342gpt-5Skin microbiome: Treatment effect in Chagas-positive children (pre vs post) ( high in post-treatment compared to pre-treatment in 6-12 year-old child stage bolivia skin of body homo sapiens child control child stage chagas disease benznidazole municipality of tarabuco volar forearm children )2026-03-05v41 / 41pendingNo
2342gpt-5Chagas-positive children oral samples (post-treatment) + Control children oral samples (pre-treatment timepoint) + Chagas-positive children oral samples (pre-treatment) (common 6-12 year-old child stage, bolivia, pre-treatment, post-treatment, homo sapiens, oral cavity, child, control, child stage, benznidazole, chagas disease, municipality of tarabuco, children)2026-03-05v41 / 44pendingNo
2342gpt-5Control children fecal samples (pre-treatment timepoint) + Chagas-positive children fecal samples (pre-treatment) + Chagas-positive children fecal samples (post-treatment) + Control children fecal samples (post-treatment timepoint) (common 6-12 year-old child stage, bolivia, pre-treatment, post-treatment, homo sapiens, child, control, child stage, benznidazole, chagas disease, municipality of tarabuco, feces, children)2026-03-05v41 / 111pendingNo
2342gpt-5Chagas-positive children skin samples (pre-treatment) + Control children skin samples (pre-treatment timepoint) (common 6-12 year-old child stage, bolivia, pre-treatment, skin of body, homo sapiens, child, control, child stage, chagas disease, benznidazole, municipality of tarabuco, volar forearm, children)2026-03-05v41 / 126pendingNo
2342gpt-5Control children skin samples (post-treatment timepoint) + Chagas-positive children skin samples (post-treatment) (common 6-12 year-old child stage, bolivia, post-treatment, skin of body, homo sapiens, child, control, child stage, chagas disease, benznidazole, municipality of tarabuco, volar forearm, children)2026-03-05v41 / 170pendingNo
2342gpt-5Control children oral samples (post-treatment timepoint) (common 6-12 year-old child stage, bolivia, post-treatment, children, homo sapiens, oral cavity, child, control, child stage, municipality of tarabuco)2026-03-05v41 / 239pendingNo

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