Experiment ID: 2329

Field Description
namestunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa (6130352) - gpt-5
proj_id6130352
sraprjeb27868
date_of_upload05/03/2026 06:05
doi10.1073/pnas.1806573115
modelgpt-5
sample_groups_version18
dbbact_id425
dbbact_linkhttps://dbbact.org/exp_info/425
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
bangui0.666667
central african republic0.500000
madagascar0.400000
child stage0.285714
LOWER IN hospital0.285714
hospital0.166667
LOWER IN stomach0.125000
stomach0.105263
LOWER IN feces0.055556
homo sapiens0.005168
feces0.004566
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN hospital1.000000
bangui0.500000
central african republic0.333333
madagascar0.250000
child stage0.166667
hospital0.100000
LOWER IN stomach0.100000
stomach0.058824
LOWER IN feces0.033333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
madagascar1.000000
antananarivo-renivohitra district1.000000
stunting1.000000
pediatric environmental enteropathy1.000000
homo sapiens1.000000
bangui1.000000
central african republic1.000000
child stage1.000000
hospital0.500000
stomach0.500000
stunted children only0.500000
community setting0.500000
case-control0.500000
feces0.500000
LOWER IN community setting0.166667
LOWER IN case-control0.166667
LOWER IN feces0.166667
LOWER IN hospital0.166667
LOWER IN stomach0.166667
LOWER IN stunted children only0.166667
Number of experiments associating the term to the sequence
TermScore
hospital1.000000
stomach1.000000
stunted children only1.000000
LOWER IN community setting1.000000
LOWER IN case-control1.000000
LOWER IN feces1.000000
madagascar1.000000
antananarivo-renivohitra district1.000000
stunting1.000000
pediatric environmental enteropathy1.000000
homo sapiens1.000000
bangui1.000000
central african republic1.000000
child stage1.000000
community setting1.000000
case-control1.000000
feces1.000000
LOWER IN hospital1.000000
LOWER IN stomach1.000000
LOWER IN stunted children only1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2329gpt-5Human fecal samples (Afribiota 16S study) (dominant madagascar, antananarivo-renivohitra district, stunting, pediatric environmental enteropathy, homo sapiens, community setting, case-control, bangui, central african republic, feces, child stage)2026-03-05v41 / 14pendingNo
2329gpt-5Human gastric (stomach) samples (Afribiota 16S study) (dominant madagascar, antananarivo-renivohitra district, stomach, pediatric environmental enteropathy, stunting, homo sapiens, hospital, stunted children only, bangui, central african republic, child stage)2026-03-05v41 / 23pendingNo
2329gpt-5Human fecal samples (Afribiota 16S study) (common madagascar, antananarivo-renivohitra district, stunting, pediatric environmental enteropathy, homo sapiens, community setting, case-control, bangui, central african republic, feces, child stage)2026-03-05v41 / 61pendingNo
2329gpt-5Human gastric (stomach) samples (Afribiota 16S study) (common madagascar, antananarivo-renivohitra district, stomach, pediatric environmental enteropathy, stunting, homo sapiens, hospital, stunted children only, bangui, central african republic, child stage)2026-03-05v41 / 105pendingNo
2329gpt-5Fecal vs gastric (stomach) microbiota in Afribiota cohort ( high in community setting case-control feces compared to hospital stomach stunted children only in madagascar antananarivo-renivohitra district stunting pediatric environmental enteropathy homo sapiens bangui central african republic child stage )2026-03-05v41 / 116pendingNo
2329gpt-5Fecal vs gastric (stomach) microbiota in Afribiota cohort ( high in hospital stomach stunted children only compared to community setting case-control feces in madagascar antananarivo-renivohitra district stunting pediatric environmental enteropathy homo sapiens bangui central african republic child stage )2026-03-05v41 / 408pendingNo

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