Experiment ID: 2316

Field Description
namethe effect of the timing of exposure to campylobacter jejuni on the gut microbiome and inflammatory responses of broiler chickens (5948730) - gpt-5
proj_id5948730
sraprjna380214
date_of_upload05/03/2026 05:59
doi10.1186/s40168-018-0477-5
modelgpt-5
sample_groups_version18
dbbact_id379
dbbact_linkhttps://dbbact.org/exp_info/379
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
barn0.666667
broiler chicken0.200000
united kingdom0.117647
male organism0.111111
gallus gallus0.086957
caecum0.039216
LOWER IN control0.008850
control0.008811
Fraction of dbbact annotations with this term covered by the query
TermScore
barn0.500000
broiler chicken0.111111
united kingdom0.062500
male organism0.058824
gallus gallus0.045455
caecum0.020000
LOWER IN control0.004545
control0.004444
Exp. ID User ID Description Date Region Sequences Status Flag
2316gpt-5Cecal microbiome of broiler chickens: Campylobacter jejuni exposure vs unexposed controls ( high in experimental process infectious disease campylobacter jejuni colonization compared to unexposed to campylobacter jejuni control in ross 308 strain caecum united kingdom laboratory facility barn loughborough male organism broiler chicken gallus gallus )2026-03-05v41 / 12pendingNo
2316gpt-5Cecal microbiome of broiler chickens: Campylobacter jejuni exposure vs unexposed controls ( high in unexposed to campylobacter jejuni control compared to experimental process infectious disease campylobacter jejuni colonization in ross 308 strain caecum united kingdom laboratory facility barn loughborough male organism broiler chicken gallus gallus )2026-03-05v41 / 20pendingNo
2316gpt-5Control broiler chicken cecal samples (no Campylobacter exposure) (dominant ross 308 strain, unexposed to campylobacter jejuni, caecum, united kingdom, control, laboratory facility, male organism, barn, loughborough, broiler chicken, gallus gallus)2026-03-05v41 / 22pendingNo
2316gpt-5Campylobacter jejuni–exposed broiler chicken cecal samples (dominant campylobacter jejuni colonization, ross 308 strain, caecum, united kingdom, laboratory facility, male organism, infectious disease, barn, loughborough, experimental process, broiler chicken, gallus gallus)2026-03-05v41 / 25pendingNo
2316gpt-5Control broiler chicken cecal samples (no Campylobacter exposure) (common ross 308 strain, unexposed to campylobacter jejuni, caecum, united kingdom, control, laboratory facility, male organism, barn, loughborough, broiler chicken, gallus gallus)2026-03-05v41 / 141pendingNo
2316gpt-5Campylobacter jejuni–exposed broiler chicken cecal samples (common campylobacter jejuni colonization, ross 308 strain, caecum, united kingdom, laboratory facility, male organism, infectious disease, barn, loughborough, experimental process, broiler chicken, gallus gallus)2026-03-05v41 / 154pendingNo

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