Experiment ID: 2275

Field Description
namethe fecal, oral, and skin microbiota of children with chagas disease treated with benznidazole (6391005) - gpt-5
proj_id6391005
sraerp113722
date_of_upload04/03/2026 15:57
doi10.1371/journal.pone.0212593
modelgpt-5
sample_groups_version18
dbbact_id517
dbbact_linkhttps://dbbact.org/exp_info/517
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
children0.666667
chagas disease0.620690
bolivia0.400000
skin of body0.384615
child stage0.285714
6-12 year-old child stage0.166667
oral cavity0.087912
child0.031746
control0.008850
homo sapiens0.005168
feces0.004530
Fraction of dbbact annotations with this term covered by the query
TermScore
children0.500000
chagas disease0.500000
skin of body0.333333
bolivia0.250000
child stage0.166667
6-12 year-old child stage0.090909
oral cavity0.050000
child0.016129
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
child stage1.000000
6-12 year-old child stage1.000000
children1.000000
homo sapiens1.000000
municipality of tarabuco1.000000
child1.000000
bolivia1.000000
control1.000000
post-treatment0.818182
benznidazole0.818182
chagas disease0.818182
pre-treatment0.545455
skin of body0.454545
volar forearm0.454545
oral cavity0.363636
feces0.181818
LOWER IN pre-treatment0.090909
Number of experiments associating the term to the sequence
TermScore
child stage1.000000
post-treatment1.000000
6-12 year-old child stage1.000000
children1.000000
homo sapiens1.000000
oral cavity1.000000
municipality of tarabuco1.000000
child1.000000
bolivia1.000000
control1.000000
benznidazole1.000000
skin of body1.000000
volar forearm1.000000
chagas disease1.000000
pre-treatment1.000000
feces1.000000
LOWER IN pre-treatment1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2275gpt-5Control children oral samples (post-treatment timepoint) (dominant child stage, post-treatment, 6-12 year-old child stage, children, homo sapiens, oral cavity, municipality of tarabuco, child, bolivia, control)2026-03-04v41 / 7pendingNo
2275gpt-5Control children oral samples (pre-treatment timepoint) + Chagas-positive children oral samples (pre-treatment) + Chagas-positive children oral samples (post-treatment) (dominant child stage, pre-treatment, post-treatment, children, 6-12 year-old child stage, homo sapiens, oral cavity, child, benznidazole, municipality of tarabuco, bolivia, chagas disease, control)2026-03-04v41 / 10pendingNo
2275gpt-5Chagas-positive children skin samples (post-treatment) + Control children skin samples (post-treatment timepoint) (dominant child stage, post-treatment, children, 6-12 year-old child stage, homo sapiens, benznidazole, child, skin of body, municipality of tarabuco, volar forearm, bolivia, chagas disease, control)2026-03-04v41 / 13pendingNo
2275gpt-5Control children fecal samples (pre-treatment timepoint) + Chagas-positive children fecal samples (pre-treatment) + Chagas-positive children fecal samples (post-treatment) + Control children fecal samples (post-treatment timepoint) (dominant child stage, pre-treatment, post-treatment, 6-12 year-old child stage, children, homo sapiens, benznidazole, municipality of tarabuco, child, feces, bolivia, chagas disease, control)2026-03-04v41 / 16pendingNo
2275gpt-5Control children skin samples (pre-treatment timepoint) + Chagas-positive children skin samples (pre-treatment) (dominant child stage, pre-treatment, children, 6-12 year-old child stage, homo sapiens, benznidazole, child, skin of body, municipality of tarabuco, volar forearm, bolivia, chagas disease, control)2026-03-04v41 / 16pendingNo
2275gpt-5Skin microbiome: Treatment effect in Chagas-positive children (pre vs post) ( high in post-treatment compared to pre-treatment in child stage children 6-12 year-old child stage homo sapiens benznidazole municipality of tarabuco skin of body child volar forearm bolivia chagas disease control )2026-03-04v41 / 41pendingNo
2275gpt-5Control children oral samples (pre-treatment timepoint) + Chagas-positive children oral samples (pre-treatment) + Chagas-positive children oral samples (post-treatment) (common child stage, pre-treatment, post-treatment, children, 6-12 year-old child stage, homo sapiens, oral cavity, child, benznidazole, municipality of tarabuco, bolivia, chagas disease, control)2026-03-04v41 / 44pendingNo
2275gpt-5Control children fecal samples (pre-treatment timepoint) + Chagas-positive children fecal samples (pre-treatment) + Chagas-positive children fecal samples (post-treatment) + Control children fecal samples (post-treatment timepoint) (common child stage, pre-treatment, post-treatment, 6-12 year-old child stage, children, homo sapiens, benznidazole, municipality of tarabuco, child, feces, bolivia, chagas disease, control)2026-03-04v41 / 111pendingNo
2275gpt-5Control children skin samples (pre-treatment timepoint) + Chagas-positive children skin samples (pre-treatment) (common child stage, pre-treatment, children, 6-12 year-old child stage, homo sapiens, benznidazole, child, skin of body, municipality of tarabuco, volar forearm, bolivia, chagas disease, control)2026-03-04v41 / 126pendingNo
2275gpt-5Chagas-positive children skin samples (post-treatment) + Control children skin samples (post-treatment timepoint) (common child stage, post-treatment, children, 6-12 year-old child stage, homo sapiens, benznidazole, child, skin of body, municipality of tarabuco, volar forearm, bolivia, chagas disease, control)2026-03-04v41 / 170pendingNo
2275gpt-5Control children oral samples (post-treatment timepoint) (common child stage, post-treatment, 6-12 year-old child stage, children, homo sapiens, oral cavity, municipality of tarabuco, child, bolivia, control)2026-03-04v41 / 239pendingNo

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