Experiment ID: 2259

Field Description
namethe effect of the timing of exposure to campylobacter jejuni on the gut microbiome and inflammatory responses of broiler chickens (5948730) - gpt-5
proj_id5948730
sraprjna380214
date_of_upload04/03/2026 15:35
doi10.1186/s40168-018-0477-5
modelgpt-5
sample_groups_version18
dbbact_id379
dbbact_linkhttps://dbbact.org/exp_info/379
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
barn0.666667
broiler chicken0.200000
united kingdom0.117647
male organism0.111111
gallus gallus0.086957
caecum0.039216
LOWER IN control0.008850
control0.008811
Fraction of dbbact annotations with this term covered by the query
TermScore
barn0.500000
broiler chicken0.111111
united kingdom0.062500
male organism0.058824
gallus gallus0.045455
caecum0.020000
LOWER IN control0.004545
control0.004444
Exp. ID User ID Description Date Region Sequences Status Flag
2259gpt-5Cecal microbiome of broiler chickens: Campylobacter jejuni exposure vs unexposed controls ( high in infectious disease campylobacter jejuni colonization experimental process compared to unexposed to campylobacter jejuni control in laboratory facility united kingdom ross 308 strain male organism loughborough gallus gallus broiler chicken barn caecum )2026-03-04v41 / 12pendingNo
2259gpt-5Cecal microbiome of broiler chickens: Campylobacter jejuni exposure vs unexposed controls ( high in unexposed to campylobacter jejuni control compared to infectious disease campylobacter jejuni colonization experimental process in laboratory facility united kingdom ross 308 strain male organism loughborough gallus gallus broiler chicken barn caecum )2026-03-04v41 / 20pendingNo
2259gpt-5Control broiler chicken cecal samples (no Campylobacter exposure) (dominant laboratory facility, united kingdom, control, ross 308 strain, male organism, loughborough, gallus gallus, broiler chicken, unexposed to campylobacter jejuni, barn, caecum)2026-03-04v41 / 22pendingNo
2259gpt-5Campylobacter jejuni–exposed broiler chicken cecal samples (dominant laboratory facility, experimental process, united kingdom, ross 308 strain, infectious disease, male organism, loughborough, gallus gallus, broiler chicken, campylobacter jejuni colonization, barn, caecum)2026-03-04v41 / 25pendingNo
2259gpt-5Control broiler chicken cecal samples (no Campylobacter exposure) (common laboratory facility, united kingdom, control, ross 308 strain, male organism, loughborough, gallus gallus, broiler chicken, unexposed to campylobacter jejuni, barn, caecum)2026-03-04v41 / 141pendingNo
2259gpt-5Campylobacter jejuni–exposed broiler chicken cecal samples (common laboratory facility, experimental process, united kingdom, ross 308 strain, infectious disease, male organism, loughborough, gallus gallus, broiler chicken, campylobacter jejuni colonization, barn, caecum)2026-03-04v41 / 154pendingNo

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