Experiment ID: 2250

Field Description
namegut microbiota offers universal biomarkers across ethnicity in inflammatory bowel disease diagnosis and infliximab response prediction (5790872) - gpt-5
proj_id5790872
sraprjeb22028
date_of_upload04/03/2026 15:25
doi10.1128/msystems.00188-17
modelgpt-5
sample_groups_version18
dbbact_id292
dbbact_linkhttps://dbbact.org/exp_info/292
needs_manual_reviewtrue

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN human adult stage0.200000
LOWER IN young adult stage0.200000
guangzhou city prefecture0.076923
young adult stage0.058824
LOWER IN inflammatory bowel disease0.058824
inflammatory bowel disease0.058824
hospital0.052632
LOWER IN crohn's disease0.025641
LOWER IN ulcerative colitis0.024390
ulcerative colitis0.023256
crohn's disease0.022222
human adult stage0.011765
china0.002364
LOWER IN control0.002278
control0.002227
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
guangzhou city prefecture1.000000
hospital1.000000
feces1.000000
china1.000000
homo sapiens1.000000
young adult stage0.500000
control0.500000
crohn's disease0.500000
inflammatory bowel disease0.500000
human adult stage0.500000
ulcerative colitis0.500000
LOWER IN ulcerative colitis0.166667
LOWER IN inflammatory bowel disease0.166667
LOWER IN human adult stage0.166667
LOWER IN crohn's disease0.166667
LOWER IN young adult stage0.166667
LOWER IN control0.166667
Number of experiments associating the term to the sequence
TermScore
young adult stage1.000000
control1.000000
LOWER IN ulcerative colitis1.000000
LOWER IN inflammatory bowel disease1.000000
LOWER IN human adult stage1.000000
LOWER IN crohn's disease1.000000
guangzhou city prefecture1.000000
hospital1.000000
feces1.000000
china1.000000
homo sapiens1.000000
crohn's disease1.000000
inflammatory bowel disease1.000000
human adult stage1.000000
ulcerative colitis1.000000
LOWER IN young adult stage1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2250gpt-5Crohn’s disease fecal samples (Chinese cohort, 16S amplicon) + Ulcerative colitis fecal samples (Chinese cohort, 16S amplicon) (dominant crohn's disease, inflammatory bowel disease, guangzhou city prefecture, human adult stage, hospital, ulcerative colitis, feces, china, homo sapiens)2026-03-04v41 / 17pendingNo
2250gpt-5Healthy control fecal samples (Chinese cohort, 16S amplicon) (dominant guangzhou city prefecture, control, hospital, feces, china, homo sapiens, young adult stage)2026-03-04v41 / 20pendingNo
2250gpt-5IBD (CD + UC) vs healthy controls (Chinese cohort, fecal 16S) ( high in ulcerative colitis inflammatory bowel disease human adult stage crohn's disease compared to young adult stage control in guangzhou city prefecture hospital feces china homo sapiens )2026-03-04v41 / 48pendingNo
2250gpt-5Crohn’s disease fecal samples (Chinese cohort, 16S amplicon) + Ulcerative colitis fecal samples (Chinese cohort, 16S amplicon) (common crohn's disease, inflammatory bowel disease, guangzhou city prefecture, human adult stage, hospital, ulcerative colitis, feces, china, homo sapiens)2026-03-04v41 / 69pendingNo
2250gpt-5Healthy control fecal samples (Chinese cohort, 16S amplicon) (common guangzhou city prefecture, control, hospital, feces, china, homo sapiens, young adult stage)2026-03-04v41 / 91pendingNo
2250gpt-5IBD (CD + UC) vs healthy controls (Chinese cohort, fecal 16S) ( high in young adult stage control compared to ulcerative colitis inflammatory bowel disease human adult stage crohn's disease in guangzhou city prefecture hospital feces china homo sapiens )2026-03-04v41 / 243pendingNo

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