Experiment ID: 2250

Field Description
namegut microbiota offers universal biomarkers across ethnicity in inflammatory bowel disease diagnosis and infliximab response prediction (5790872) - gpt-5
proj_id5790872
sraprjeb22028
date_of_upload04/03/2026 15:25
doi10.1128/msystems.00188-17
modelgpt-5
sample_groups_version18
dbbact_id292
dbbact_linkhttps://dbbact.org/exp_info/292
needs_manual_reviewtrue

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN human adult stage0.333333
LOWER IN young adult stage0.333333
guangzhou city prefecture0.142857
young adult stage0.111111
LOWER IN inflammatory bowel disease0.111111
inflammatory bowel disease0.111111
hospital0.100000
LOWER IN crohn's disease0.050000
LOWER IN ulcerative colitis0.047619
ulcerative colitis0.045455
crohn's disease0.043478
human adult stage0.023256
china0.004717
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
guangzhou city prefecture1.000000
hospital1.000000
feces1.000000
china1.000000
homo sapiens1.000000
young adult stage0.500000
control0.500000
crohn's disease0.500000
inflammatory bowel disease0.500000
human adult stage0.500000
ulcerative colitis0.500000
LOWER IN ulcerative colitis0.166667
LOWER IN inflammatory bowel disease0.166667
LOWER IN human adult stage0.166667
LOWER IN crohn's disease0.166667
LOWER IN young adult stage0.166667
LOWER IN control0.166667
Number of experiments associating the term to the sequence
TermScore
young adult stage1.000000
control1.000000
LOWER IN ulcerative colitis1.000000
LOWER IN inflammatory bowel disease1.000000
LOWER IN human adult stage1.000000
LOWER IN crohn's disease1.000000
guangzhou city prefecture1.000000
hospital1.000000
feces1.000000
china1.000000
homo sapiens1.000000
crohn's disease1.000000
inflammatory bowel disease1.000000
human adult stage1.000000
ulcerative colitis1.000000
LOWER IN young adult stage1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2250gpt-5Crohn’s disease fecal samples (Chinese cohort, 16S amplicon) + Ulcerative colitis fecal samples (Chinese cohort, 16S amplicon) (dominant crohn's disease, inflammatory bowel disease, guangzhou city prefecture, human adult stage, hospital, ulcerative colitis, feces, china, homo sapiens)2026-03-04v41 / 17pendingNo
2250gpt-5Healthy control fecal samples (Chinese cohort, 16S amplicon) (dominant guangzhou city prefecture, control, hospital, feces, china, homo sapiens, young adult stage)2026-03-04v41 / 20pendingNo
2250gpt-5IBD (CD + UC) vs healthy controls (Chinese cohort, fecal 16S) ( high in ulcerative colitis inflammatory bowel disease human adult stage crohn's disease compared to young adult stage control in guangzhou city prefecture hospital feces china homo sapiens )2026-03-04v41 / 48pendingNo
2250gpt-5Crohn’s disease fecal samples (Chinese cohort, 16S amplicon) + Ulcerative colitis fecal samples (Chinese cohort, 16S amplicon) (common crohn's disease, inflammatory bowel disease, guangzhou city prefecture, human adult stage, hospital, ulcerative colitis, feces, china, homo sapiens)2026-03-04v41 / 69pendingNo
2250gpt-5Healthy control fecal samples (Chinese cohort, 16S amplicon) (common guangzhou city prefecture, control, hospital, feces, china, homo sapiens, young adult stage)2026-03-04v41 / 91pendingNo
2250gpt-5IBD (CD + UC) vs healthy controls (Chinese cohort, fecal 16S) ( high in young adult stage control compared to ulcerative colitis inflammatory bowel disease human adult stage crohn's disease in guangzhou city prefecture hospital feces china homo sapiens )2026-03-04v41 / 243pendingNo

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