Experiment ID: 2242

Field Description
namenovel microbial assemblages dominate weathered sulfide-bearing rock from copper-nickel deposits in the duluth complex, minnesota, usa (5541219) - gpt-5
proj_id5541219
srasrp103471
date_of_upload04/03/2026 15:15
doi10.1128/aem.00909-17
modelgpt-5
sample_groups_version18
dbbact_id205
dbbact_linkhttps://dbbact.org/exp_info/205
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
duluth complex0.604651
field0.564103
mine tailing0.484848
ph 4.5-70.484848
subsurface0.370370
rock0.333333
LOWER IN ph 5.5-6.50.320000
ph 7.30.320000
greenschist0.320000
LOWER IN mine tailing0.300000
LOWER IN ph 4.5-70.300000
LOWER IN ph 40.300000
ph 40.270270
LOWER IN subsurface0.260870
LOWER IN field0.260870
ph 5.5-6.50.230769
LOWER IN ph 7.30.210526
LOWER IN greenschist0.210526
LOWER IN duluth complex0.210526
state of minnesota0.200000
LOWER IN 0.187500
united states of america0.006645
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN mine tailing1.000000
LOWER IN ph 4.5-71.000000
LOWER IN ph 7.31.000000
LOWER IN greenschist1.000000
LOWER IN ph 41.000000
LOWER IN duluth complex1.000000
subsurface0.500000
field0.500000
LOWER IN ph 5.5-6.50.500000
duluth complex0.500000
mine tailing0.500000
ph 4.5-70.500000
LOWER IN subsurface0.500000
LOWER IN field0.500000
ph 7.30.500000
greenschist0.500000
ph 5.5-6.50.333333
ph 40.250000
rock0.200000
LOWER IN 0.200000
state of minnesota0.111111
united states of america0.003333
Fraction of annotations for the query sequences containing the term
TermScore
rock1.000000
state of minnesota1.000000
united states of america1.000000
duluth complex0.764706
sulfide-bearing rock0.764706
field0.647059
laboratory facility0.529412
mine tailing0.470588
ph 4.5-70.470588
moderately acidic0.470588
weekly leachate collection0.352941
humidity cell test0.352941
kinetic test0.352941
humidity cell0.352941
weathering experiment0.352941
subsurface0.294118
experimental process0.294118
surface soil0.294118
sampling depth 15 cm0.294118
sampling depth 0-2.5 cm0.294118
ph 40.294118
LOWER IN ph 5.5-6.50.235294
LOWER IN drying-rewetting cycles0.235294
LOWER IN reactor test0.235294
ely greenstone0.235294
pyrite-bearing rock0.235294
ph 7.30.235294
acid-generating potential0.235294
greenschist0.235294
LOWER IN mine tailing0.176471
LOWER IN weekly leachate collection0.176471
LOWER IN ph 4.5-70.176471
LOWER IN moderately acidic0.176471
LOWER IN humidity cell test0.176471
ph 5.5-6.50.176471
drying-rewetting cycles0.176471
reactor test0.176471
LOWER IN subsurface0.176471
LOWER IN field0.176471
LOWER IN experimental process0.176471
LOWER IN surface soil0.176471
LOWER IN sampling depth 15 cm0.176471
LOWER IN 0.176471
LOWER IN sampling depth 0-2.5 cm0.176471
LOWER IN ph 40.176471
LOWER IN laboratory facility0.117647
LOWER IN ely greenstone0.117647
LOWER IN pyrite-bearing rock0.117647
LOWER IN kinetic test0.117647
LOWER IN humidity cell0.117647
LOWER IN ph 7.30.117647
LOWER IN weathering experiment0.117647
LOWER IN acid-generating potential0.117647
LOWER IN greenschist0.117647
LOWER IN duluth complex0.117647
LOWER IN sulfide-bearing rock0.117647
coal mine waste material0.117647
copper-nickel deposit0.117647
Number of experiments associating the term to the sequence
TermScore
subsurface1.000000
field1.000000
experimental process1.000000
surface soil1.000000
sampling depth 15 cm1.000000
sampling depth 0-2.5 cm1.000000
ph 41.000000
LOWER IN mine tailing1.000000
LOWER IN ph 5.5-6.51.000000
LOWER IN laboratory facility1.000000
LOWER IN weekly leachate collection1.000000
LOWER IN drying-rewetting cycles1.000000
LOWER IN ph 4.5-71.000000
LOWER IN reactor test1.000000
LOWER IN moderately acidic1.000000
LOWER IN humidity cell test1.000000
duluth complex1.000000
rock1.000000
state of minnesota1.000000
sulfide-bearing rock1.000000
united states of america1.000000
ph 5.5-6.51.000000
drying-rewetting cycles1.000000
reactor test1.000000
laboratory facility1.000000
LOWER IN ely greenstone1.000000
LOWER IN pyrite-bearing rock1.000000
LOWER IN kinetic test1.000000
LOWER IN humidity cell1.000000
LOWER IN ph 7.31.000000
LOWER IN weathering experiment1.000000
LOWER IN acid-generating potential1.000000
LOWER IN greenschist1.000000
mine tailing1.000000
weekly leachate collection1.000000
ph 4.5-71.000000
moderately acidic1.000000
humidity cell test1.000000
LOWER IN subsurface1.000000
LOWER IN field1.000000
LOWER IN experimental process1.000000
LOWER IN surface soil1.000000
LOWER IN sampling depth 15 cm1.000000
LOWER IN 1.000000
LOWER IN sampling depth 0-2.5 cm1.000000
LOWER IN ph 41.000000
ely greenstone1.000000
pyrite-bearing rock1.000000
kinetic test1.000000
humidity cell1.000000
ph 7.31.000000
weathering experiment1.000000
acid-generating potential1.000000
greenschist1.000000
LOWER IN duluth complex1.000000
LOWER IN sulfide-bearing rock1.000000
coal mine waste material1.000000
copper-nickel deposit1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2242gpt-5Duluth Complex weathered rock samples (16S amplicon) (common duluth complex, mine tailing, laboratory facility, rock, kinetic test, coal mine waste material, field, humidity cell, state of minnesota, sulfide-bearing rock, copper-nickel deposit, weathering experiment, ph 4.5-7, united states of america, moderately acidic)2026-03-04v41 / 9pendingNo
2242gpt-5Duluth Complex field rock pile samples (16S amplicon) (dominant duluth complex, subsurface, rock, field, experimental process, surface soil, state of minnesota, sampling depth 15 cm, sulfide-bearing rock, , united states of america, sampling depth 0-2.5 cm, ph 4)2026-03-04v41 / 9pendingNo
2242gpt-5Within Duluth Complex laboratory tests: humidity cell vs reactor ( high in mine tailing weekly leachate collection ph 4.5-7 moderately acidic humidity cell test compared to ph 5.5-6.5 reactor test drying-rewetting cycles in duluth complex laboratory facility rock state of minnesota sulfide-bearing rock united states of america )2026-03-04v41 / 9pendingNo
2242gpt-5Duluth Complex weathered rock samples (16S amplicon) (dominant duluth complex, mine tailing, laboratory facility, rock, kinetic test, coal mine waste material, field, humidity cell, state of minnesota, sulfide-bearing rock, copper-nickel deposit, weathering experiment, ph 4.5-7, united states of america, moderately acidic)2026-03-04v41 / 12pendingNo
2242gpt-5Duluth Complex humidity cell samples (16S amplicon) (dominant duluth complex, mine tailing, laboratory facility, rock, weekly leachate collection, state of minnesota, sulfide-bearing rock, ph 4.5-7, united states of america, moderately acidic, humidity cell test)2026-03-04v41 / 13pendingNo
2242gpt-5Ely Greenstone weathered rock samples (16S amplicon) (dominant ely greenstone, pyrite-bearing rock, rock, kinetic test, field, humidity cell, state of minnesota, acid-generating potential, ph 7.3, weathering experiment, united states of america, greenschist)2026-03-04v41 / 26pendingNo
2242gpt-5Duluth Complex laboratory weathering (combined) vs Ely Greenstone weathered rock ( high in duluth complex mine tailing laboratory facility ph 5.5-6.5 weekly leachate collection drying-rewetting cycles sulfide-bearing rock ph 4.5-7 reactor test moderately acidic humidity cell test compared to ely greenstone pyrite-bearing rock kinetic test field humidity cell ph 7.3 weathering experiment acid-generating potential greenschist in united states of america rock state of minnesota )2026-03-04v41 / 53pendingNo
2242gpt-5Ely Greenstone weathered rock samples (16S amplicon) (common ely greenstone, pyrite-bearing rock, rock, kinetic test, field, humidity cell, state of minnesota, acid-generating potential, ph 7.3, weathering experiment, united states of america, greenschist)2026-03-04v41 / 54pendingNo
2242gpt-5Duluth Complex humidity cell samples (16S amplicon) (common duluth complex, mine tailing, laboratory facility, rock, weekly leachate collection, state of minnesota, sulfide-bearing rock, ph 4.5-7, united states of america, moderately acidic, humidity cell test)2026-03-04v41 / 54pendingNo
2242gpt-5Duluth Complex field rock pile samples (16S amplicon) (common duluth complex, subsurface, rock, field, experimental process, surface soil, state of minnesota, sampling depth 15 cm, sulfide-bearing rock, , united states of america, sampling depth 0-2.5 cm, ph 4)2026-03-04v41 / 72pendingNo
2242gpt-5Duluth Complex laboratory weathering (combined) vs Ely Greenstone weathered rock ( high in ely greenstone pyrite-bearing rock kinetic test field humidity cell ph 7.3 weathering experiment acid-generating potential greenschist compared to duluth complex mine tailing laboratory facility ph 5.5-6.5 weekly leachate collection drying-rewetting cycles sulfide-bearing rock ph 4.5-7 reactor test moderately acidic humidity cell test in united states of america rock state of minnesota )2026-03-04v41 / 98pendingNo
2242gpt-5Field context comparison: Duluth Complex field rock pile vs Ely Greenstone weathered rock ( high in ely greenstone pyrite-bearing rock kinetic test humidity cell ph 7.3 weathering experiment acid-generating potential greenschist compared to duluth complex subsurface experimental process surface soil sampling depth 15 cm sulfide-bearing rock sampling depth 0-2.5 cm ph 4 in united states of america field rock state of minnesota )2026-03-04v41 / 137pendingNo
2242gpt-5Duluth Complex: controlled humidity cell tests vs all other Duluth weathering contexts ( high in mine tailing weekly leachate collection ph 4.5-7 moderately acidic humidity cell test compared to subsurface ph 5.5-6.5 drying-rewetting cycles field experimental process surface soil sampling depth 15 cm sampling depth 0-2.5 cm reactor test ph 4 in duluth complex laboratory facility rock state of minnesota sulfide-bearing rock united states of america )2026-03-04v41 / 201pendingNo
2242gpt-5Within Duluth Complex: laboratory weathering mode (humidity cell + reactor) vs field rock pile ( high in mine tailing ph 5.5-6.5 laboratory facility weekly leachate collection drying-rewetting cycles ph 4.5-7 reactor test moderately acidic humidity cell test compared to subsurface field experimental process surface soil sampling depth 15 cm sampling depth 0-2.5 cm ph 4 in duluth complex rock state of minnesota sulfide-bearing rock united states of america )2026-03-04v41 / 225pendingNo
2242gpt-5Field context comparison: Duluth Complex field rock pile vs Ely Greenstone weathered rock ( high in duluth complex subsurface experimental process surface soil sampling depth 15 cm sulfide-bearing rock sampling depth 0-2.5 cm ph 4 compared to ely greenstone pyrite-bearing rock kinetic test humidity cell ph 7.3 weathering experiment acid-generating potential greenschist in united states of america field rock state of minnesota )2026-03-04v41 / 263pendingNo
2242gpt-5Duluth Complex: controlled humidity cell tests vs all other Duluth weathering contexts ( high in subsurface ph 5.5-6.5 drying-rewetting cycles field experimental process surface soil sampling depth 15 cm sampling depth 0-2.5 cm reactor test ph 4 compared to mine tailing weekly leachate collection ph 4.5-7 moderately acidic humidity cell test in duluth complex laboratory facility rock state of minnesota sulfide-bearing rock united states of america )2026-03-04v41 / 564pendingNo
2242gpt-5Within Duluth Complex: laboratory weathering mode (humidity cell + reactor) vs field rock pile ( high in subsurface field experimental process surface soil sampling depth 15 cm sampling depth 0-2.5 cm ph 4 compared to mine tailing ph 5.5-6.5 laboratory facility weekly leachate collection drying-rewetting cycles ph 4.5-7 reactor test moderately acidic humidity cell test in duluth complex rock state of minnesota sulfide-bearing rock united states of america )2026-03-04v41 / 1070pendingNo

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