Experiment ID: 2234

Field Description
namecomparison of collection methods for fecal samples in microbiome studies (5253972) - gpt-5
proj_id5253972
sraprjeb13895
date_of_upload04/03/2026 15:06
doi10.1093/aje/kww177
modelgpt-5
sample_groups_version18
dbbact_id177
dbbact_linkhttps://dbbact.org/exp_info/177
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
human adult stage0.045455
united states of america0.006645
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
human adult stage0.023256
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
20141.000000
healthy volunteers1.000000
mayo clinic1.000000
city of rochester1.000000
human adult stage1.000000
united states of america1.000000
homo sapiens1.000000
feces1.000000
fecal occult blood test card0.333333
fecal immunochemical test tube0.333333
rnalater0.333333
ethanol0.333333
no additive0.333333
LOWER IN ethanol0.166667
LOWER IN rnalater0.166667
LOWER IN no additive0.166667
LOWER IN fecal immunochemical test tube0.166667
LOWER IN fecal occult blood test card0.166667
Number of experiments associating the term to the sequence
TermScore
fecal occult blood test card1.000000
LOWER IN ethanol1.000000
LOWER IN rnalater1.000000
LOWER IN no additive1.000000
20141.000000
healthy volunteers1.000000
mayo clinic1.000000
city of rochester1.000000
human adult stage1.000000
united states of america1.000000
homo sapiens1.000000
feces1.000000
LOWER IN fecal immunochemical test tube1.000000
fecal immunochemical test tube1.000000
rnalater1.000000
ethanol1.000000
no additive1.000000
LOWER IN fecal occult blood test card1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2234gpt-5FIT tube vs no additive to evaluate clinical screening preservative effects ( high in ethanol rnalater no additive compared to fecal immunochemical test tube in 2014 healthy volunteers mayo clinic city of rochester human adult stage united states of america homo sapiens feces )2026-03-04v41 / 7pendingNo
2234gpt-5Human fecal samples preserved with FIT tubes (Mayo Fecal Stability Study II) (dominant 2014, healthy volunteers, mayo clinic, fecal immunochemical test tube, city of rochester, human adult stage, united states of america, homo sapiens, feces)2026-03-04v41 / 17pendingNo
2234gpt-5Human fecal samples preserved on FOBT cards (Mayo Fecal Stability Study II) (dominant 2014, healthy volunteers, mayo clinic, fecal occult blood test card, city of rochester, human adult stage, united states of america, homo sapiens, feces)2026-03-04v41 / 19pendingNo
2234gpt-5Human fecal samples preserved with 95% ethanol (Mayo Fecal Stability Study II) + Human fecal samples preserved with no additive (Mayo Fecal Stability Study II) + Human fecal samples preserved with RNAlater (Mayo Fecal Stability Study II) (dominant 2014, healthy volunteers, mayo clinic, united states of america, rnalater, ethanol, city of rochester, human adult stage, no additive, homo sapiens, feces)2026-03-04v41 / 20pendingNo
2234gpt-5FIT tube vs no additive to evaluate clinical screening preservative effects ( high in fecal immunochemical test tube compared to ethanol rnalater no additive in 2014 healthy volunteers mayo clinic city of rochester human adult stage united states of america homo sapiens feces )2026-03-04v41 / 22pendingNo
2234gpt-5FOBT card vs no additive to test card-based collection impact ( high in ethanol rnalater no additive compared to fecal occult blood test card in 2014 healthy volunteers mayo clinic city of rochester human adult stage united states of america homo sapiens feces )2026-03-04v41 / 24pendingNo
2234gpt-5FIT tube vs FOBT card: clinical kit comparison ( high in fecal immunochemical test tube compared to fecal occult blood test card in 2014 healthy volunteers mayo clinic city of rochester human adult stage united states of america homo sapiens feces )2026-03-04v41 / 60pendingNo
2234gpt-5Human fecal samples preserved with 95% ethanol (Mayo Fecal Stability Study II) + Human fecal samples preserved with no additive (Mayo Fecal Stability Study II) + Human fecal samples preserved with RNAlater (Mayo Fecal Stability Study II) (common 2014, healthy volunteers, mayo clinic, united states of america, rnalater, ethanol, city of rochester, human adult stage, no additive, homo sapiens, feces)2026-03-04v41 / 91pendingNo
2234gpt-5Human fecal samples preserved with FIT tubes (Mayo Fecal Stability Study II) (common 2014, healthy volunteers, mayo clinic, fecal immunochemical test tube, city of rochester, human adult stage, united states of america, homo sapiens, feces)2026-03-04v41 / 95pendingNo
2234gpt-5FIT tube vs FOBT card: clinical kit comparison ( high in fecal occult blood test card compared to fecal immunochemical test tube in 2014 healthy volunteers mayo clinic city of rochester human adult stage united states of america homo sapiens feces )2026-03-04v41 / 102pendingNo
2234gpt-5Human fecal samples preserved on FOBT cards (Mayo Fecal Stability Study II) (common 2014, healthy volunteers, mayo clinic, fecal occult blood test card, city of rochester, human adult stage, united states of america, homo sapiens, feces)2026-03-04v41 / 105pendingNo
2234gpt-5FOBT card vs no additive to test card-based collection impact ( high in fecal occult blood test card compared to ethanol rnalater no additive in 2014 healthy volunteers mayo clinic city of rochester human adult stage united states of america homo sapiens feces )2026-03-04v41 / 152pendingNo

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