Experiment ID: 2233

Field Description
nameamphibian gut microbiota shifts differentially in community structure but converges on habitat-specific predicted functions (5171763) - gpt-5
proj_id5171763
sraprjna320968
date_of_upload04/03/2026 15:05
doi10.1038/ncomms13699
modelgpt-5
sample_groups_version18
dbbact_id149
dbbact_linkhttps://dbbact.org/exp_info/149
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
bonn0.666667
larva0.666667
digestive tract0.666667
field0.500000
amphibian larval stage0.500000
stream0.500000
salamandra salamandra0.400000
LOWER IN field0.250000
pond0.181818
stomach0.111111
germany0.076923
intestine0.062500
Fraction of dbbact annotations with this term covered by the query
TermScore
field0.500000
bonn0.500000
larva0.500000
digestive tract0.500000
LOWER IN field0.500000
amphibian larval stage0.333333
stream0.333333
salamandra salamandra0.250000
pond0.100000
stomach0.058824
germany0.040000
intestine0.032258
Fraction of annotations for the query sequences containing the term
TermScore
salamandra salamandra1.000000
amphibian larval stage1.000000
stream1.000000
bonn1.000000
pond1.000000
stomach1.000000
larva1.000000
intestine1.000000
germany1.000000
forst1.000000
digestive tract1.000000
field0.500000
reciprocal transfer0.500000
second batch0.500000
experimental enclosure0.500000
LOWER IN reciprocal transfer0.166667
LOWER IN first batch0.166667
LOWER IN second batch0.166667
LOWER IN experimental enclosure0.166667
first batch0.166667
LOWER IN field0.166667
Number of experiments associating the term to the sequence
TermScore
field1.000000
LOWER IN reciprocal transfer1.000000
LOWER IN first batch1.000000
LOWER IN second batch1.000000
LOWER IN experimental enclosure1.000000
salamandra salamandra1.000000
amphibian larval stage1.000000
stream1.000000
bonn1.000000
pond1.000000
stomach1.000000
larva1.000000
intestine1.000000
germany1.000000
forst1.000000
digestive tract1.000000
reciprocal transfer1.000000
first batch1.000000
second batch1.000000
experimental enclosure1.000000
LOWER IN field1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2233gpt-5Field survey salamander gut samples (pond and stream habitats) (dominant salamandra salamandra, amphibian larval stage, stream, bonn, pond, stomach, field, larva, intestine, germany, forst, digestive tract)2026-03-04v41 / 13pendingNo
2233gpt-5Reciprocal transfer experiment salamander gut samples (second transfer batch) (dominant experimental enclosure, salamandra salamandra, amphibian larval stage, stream, bonn, pond, stomach, second batch, larva, intestine, germany, forst, digestive tract, reciprocal transfer)2026-03-04v41 / 22pendingNo
2233gpt-5Field survey salamander gut samples (pond and stream habitats) (common salamandra salamandra, amphibian larval stage, stream, bonn, pond, stomach, field, larva, intestine, germany, forst, digestive tract)2026-03-04v41 / 57pendingNo
2233gpt-5Reciprocal transfer experiment salamander gut samples (second transfer batch) (common experimental enclosure, salamandra salamandra, amphibian larval stage, stream, bonn, pond, stomach, second batch, larva, intestine, germany, forst, digestive tract, reciprocal transfer)2026-03-04v41 / 68pendingNo
2233gpt-5Field survey vs laboratory reciprocal transfer (all transfers combined) ( high in reciprocal transfer first batch second batch experimental enclosure compared to field in salamandra salamandra amphibian larval stage stream bonn pond stomach larva intestine germany forst digestive tract )2026-03-04v41 / 271pendingNo
2233gpt-5Field survey vs laboratory reciprocal transfer (all transfers combined) ( high in field compared to reciprocal transfer first batch second batch experimental enclosure in salamandra salamandra amphibian larval stage stream bonn pond stomach larva intestine germany forst digestive tract )2026-03-04v41 / 349pendingNo

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