Experiment ID: 2225

Field Description
nameillumina miseq phylogenetic amplicon sequencing shows a large reduction of an uncharacterised succinivibrionaceae and an increase of the methanobrevibacter gottschalkii clade in feed restricted cattle (4520551) - gpt-5
proj_id4520551
sraprjna289250
date_of_upload04/03/2026 14:51
doi10.1371/journal.pone.0133234
modelgpt-5
sample_groups_version18
dbbact_id83
dbbact_linkhttps://dbbact.org/exp_info/83
needs_manual_reviewfalse

Annotations for experiment:

term enrichment score
TermScore
ad libitum diet0.666667
male organism0.111111
bos taurus0.100000
rumen0.071429
Fraction of dbbact annotations with this term covered by the query
TermScore
ad libitum diet0.500000
male organism0.058824
bos taurus0.052632
rumen0.037037
Fraction of annotations for the query sequences containing the term
TermScore
male organism1.000000
feed restriction1.000000
county meath1.000000
republic of ireland1.000000
abattoir1.000000
bos taurus1.000000
ad libitum diet1.000000
bull1.000000
holstein-friesian1.000000
rumen1.000000
Number of experiments associating the term to the sequence
TermScore
male organism1.000000
feed restriction1.000000
county meath1.000000
republic of ireland1.000000
abattoir1.000000
bos taurus1.000000
ad libitum diet1.000000
bull1.000000
holstein-friesian1.000000
rumen1.000000

Problems / suggestions? Please visit the dbBact forum