Experiment ID: 2210

Field Description
namenew york city house mice (mus musculus) as potential reservoirs for pathogenic bacteria and antimicrobial resistance determinants (5904414) - gpt-5
proj_id5904414
srasrp136544
date_of_upload01/03/2026 20:05
doi10.1128/mbio.00624-18
modelgpt-5
sample_groups_version18
dbbact_id337
dbbact_linkhttps://dbbact.org/exp_info/337
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
urban biome0.400000
new york city0.250000
mus musculus0.027027
united states of america0.006645
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
urban biome0.250000
new york city0.142857
mus musculus0.013699
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
new york city1.000000
residential building1.000000
feces1.000000
urban biome1.000000
room1.000000
mus musculus1.000000
united states of america1.000000
manhattan borough0.666667
queens borough0.416667
fresh meadows0.416667
chelsea0.416667
bronx borough0.333333
upper west side0.333333
laconia0.333333
LOWER IN chelsea0.250000
LOWER IN queens borough0.250000
LOWER IN fresh meadows0.250000
LOWER IN manhattan borough0.166667
LOWER IN bronx borough0.166667
LOWER IN upper west side0.166667
LOWER IN laconia0.166667
Number of experiments associating the term to the sequence
TermScore
queens borough1.000000
fresh meadows1.000000
LOWER IN chelsea1.000000
LOWER IN manhattan borough1.000000
new york city1.000000
residential building1.000000
feces1.000000
urban biome1.000000
room1.000000
mus musculus1.000000
united states of america1.000000
LOWER IN bronx borough1.000000
LOWER IN upper west side1.000000
LOWER IN laconia1.000000
bronx borough1.000000
upper west side1.000000
laconia1.000000
manhattan borough1.000000
chelsea1.000000
LOWER IN queens borough1.000000
LOWER IN fresh meadows1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2210gpt-5Upper West Side (M2) house mouse fecal samples + Laconia (X1) house mouse fecal samples (dominant new york city, residential building, bronx borough, manhattan borough, upper west side, feces, laconia, urban biome, room, mus musculus, united states of america)2026-03-01v41 / 14pendingNo
2210gpt-5Fresh Meadows (Q1) house mouse fecal samples (dominant fresh meadows, new york city, residential building, feces, urban biome, room, queens borough, mus musculus, united states of america)2026-03-01v41 / 16pendingNo
2210gpt-5Chelsea (M3) house mouse fecal samples (dominant chelsea, new york city, residential building, manhattan borough, feces, urban biome, room, mus musculus, united states of america)2026-03-01v41 / 17pendingNo
2210gpt-5Upper West Side (M2) house mouse fecal samples + Laconia (X1) house mouse fecal samples (common new york city, residential building, bronx borough, manhattan borough, upper west side, feces, laconia, urban biome, room, mus musculus, united states of america)2026-03-01v41 / 140pendingNo
2210gpt-5Queens (Fresh Meadows, Q1) vs non-Queens NYC neighborhoods ( high in chelsea bronx borough manhattan borough upper west side laconia compared to queens borough fresh meadows in new york city residential building feces urban biome room mus musculus united states of america )2026-03-01v41 / 149pendingNo
2210gpt-5High-density Manhattan site (Chelsea, M3) vs other NYC neighborhoods ( high in chelsea compared to fresh meadows bronx borough upper west side laconia queens borough in new york city residential building manhattan borough feces urban biome room mus musculus united states of america )2026-03-01v41 / 165pendingNo
2210gpt-5Chelsea (M3) house mouse fecal samples (common chelsea, new york city, residential building, manhattan borough, feces, urban biome, room, mus musculus, united states of america)2026-03-01v41 / 177pendingNo
2210gpt-5Chelsea (M3) vs Fresh Meadows (Q1) house mouse gut microbiomes ( high in chelsea manhattan borough compared to queens borough fresh meadows in new york city residential building feces urban biome room mus musculus united states of america )2026-03-01v41 / 179pendingNo
2210gpt-5Fresh Meadows (Q1) house mouse fecal samples (common fresh meadows, new york city, residential building, feces, urban biome, room, queens borough, mus musculus, united states of america)2026-03-01v41 / 214pendingNo
2210gpt-5High-density Manhattan site (Chelsea, M3) vs other NYC neighborhoods ( high in fresh meadows bronx borough upper west side laconia queens borough compared to chelsea in new york city residential building manhattan borough feces urban biome room mus musculus united states of america )2026-03-01v41 / 389pendingNo
2210gpt-5Queens (Fresh Meadows, Q1) vs non-Queens NYC neighborhoods ( high in queens borough fresh meadows compared to chelsea bronx borough manhattan borough upper west side laconia in new york city residential building feces urban biome room mus musculus united states of america )2026-03-01v41 / 435pendingNo
2210gpt-5Chelsea (M3) vs Fresh Meadows (Q1) house mouse gut microbiomes ( high in queens borough fresh meadows compared to chelsea manhattan borough in new york city residential building feces urban biome room mus musculus united states of america )2026-03-01v41 / 444pendingNo

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