Experiment ID: 2189

Field Description
namedistinct patterns in human milk microbiota and fatty acid profiles across specific geographic locations (5061857) - gpt-5
proj_id5061857
srasrp082263
date_of_upload01/03/2026 19:15
doi10.3389/fmicb.2016.01619
modelgpt-5
sample_groups_version18
dbbact_id245
dbbact_linkhttps://dbbact.org/exp_info/245
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
breast milk material0.666667
milk0.400000
urban biome0.400000
LOWER IN mediterranean0.312500
mediterranean0.312500
LOWER IN municipality of beijing0.307692
municipality of beijing0.280000
LOWER IN kingdom of spain0.270270
LOWER IN south africa0.214286
LOWER IN finland0.212766
LOWER IN china0.210526
south africa0.141414
finland0.136364
female organism0.100000
kingdom of spain0.065789
human adult stage0.045455
china0.009296
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN municipality of beijing1.000000
breast milk material0.500000
LOWER IN mediterranean0.500000
mediterranean0.500000
LOWER IN south africa0.500000
LOWER IN kingdom of spain0.333333
milk0.250000
urban biome0.250000
LOWER IN china0.250000
municipality of beijing0.250000
LOWER IN finland0.200000
south africa0.090909
finland0.090909
female organism0.052632
kingdom of spain0.038462
human adult stage0.023256
china0.004717
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
1-month postpartum1.000000
mammary gland1.000000
lactation1.000000
human adult stage1.000000
female organism1.000000
milk1.000000
urban biome1.000000
breast milk material1.000000
homo sapiens1.000000
cape town0.318182
south africa0.318182
china0.318182
municipality of beijing0.318182
finland0.272727
city of turku0.272727
LOWER IN finland0.227273
LOWER IN mediterranean0.227273
LOWER IN kingdom of spain0.227273
LOWER IN city of turku0.227273
LOWER IN valencia0.227273
mediterranean0.227273
kingdom of spain0.227273
valencia0.227273
LOWER IN china0.181818
LOWER IN municipality of beijing0.181818
LOWER IN south africa0.136364
LOWER IN cape town0.136364
Number of experiments associating the term to the sequence
TermScore
1-month postpartum1.000000
mammary gland1.000000
lactation1.000000
human adult stage1.000000
female organism1.000000
cape town1.000000
milk1.000000
south africa1.000000
urban biome1.000000
breast milk material1.000000
homo sapiens1.000000
LOWER IN china1.000000
LOWER IN finland1.000000
LOWER IN mediterranean1.000000
LOWER IN kingdom of spain1.000000
LOWER IN municipality of beijing1.000000
LOWER IN city of turku1.000000
LOWER IN valencia1.000000
finland1.000000
city of turku1.000000
china1.000000
municipality of beijing1.000000
mediterranean1.000000
kingdom of spain1.000000
valencia1.000000
LOWER IN south africa1.000000
LOWER IN cape town1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2189gpt-5Northern vs Southern latitude human milk microbiome ( high in china finland mediterranean kingdom of spain municipality of beijing city of turku valencia compared to south africa cape town in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 1pendingNo
2189gpt-5Geographic differences in human milk microbiome: China vs South Africa ( high in china municipality of beijing compared to south africa cape town in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 2pendingNo
2189gpt-5Geographic differences in human milk microbiome: China vs Spain ( high in mediterranean valencia kingdom of spain compared to china municipality of beijing in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 2pendingNo
2189gpt-5Geographic differences in human milk microbiome: Finland vs South Africa ( high in finland city of turku compared to south africa cape town in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 2pendingNo
2189gpt-5Geographic differences in human milk microbiome: Finland vs South Africa ( high in south africa cape town compared to finland city of turku in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 2pendingNo
2189gpt-5Geographic differences in human milk microbiome: South Africa vs Spain ( high in south africa cape town compared to mediterranean valencia kingdom of spain in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 2pendingNo
2189gpt-5Geographic differences in human milk microbiome: China vs Finland ( high in china municipality of beijing compared to finland city of turku in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 3pendingNo
2189gpt-5Geographic differences in human milk microbiome: China vs South Africa ( high in south africa cape town compared to china municipality of beijing in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 3pendingNo
2189gpt-5Geographic differences in human milk microbiome: Finland vs Spain ( high in mediterranean valencia kingdom of spain compared to finland city of turku in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 3pendingNo
2189gpt-5European human milk microbiome vs non-European ( high in south africa china municipality of beijing cape town compared to finland mediterranean kingdom of spain city of turku valencia in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 4pendingNo
2189gpt-5Geographic differences in human milk microbiome: China vs Spain ( high in china municipality of beijing compared to mediterranean valencia kingdom of spain in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 5pendingNo
2189gpt-5Geographic differences in human milk microbiome: Finland vs Spain ( high in finland city of turku compared to mediterranean valencia kingdom of spain in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 5pendingNo
2189gpt-5Finnish human milk samples (dominant finland, 1-month postpartum, mammary gland, lactation, human adult stage, female organism, city of turku, milk, urban biome, breast milk material, homo sapiens)2026-03-01v41 / 6pendingNo
2189gpt-5Geographic differences in human milk microbiome: China vs Finland ( high in finland city of turku compared to china municipality of beijing in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 6pendingNo
2189gpt-5Spanish human milk samples (dominant homo sapiens, 1-month postpartum, mediterranean, mammary gland, lactation, human adult stage, kingdom of spain, female organism, milk, urban biome, breast milk material, valencia)2026-03-01v41 / 9pendingNo
2189gpt-5Chinese human milk samples (common china, 1-month postpartum, mammary gland, lactation, human adult stage, female organism, municipality of beijing, milk, urban biome, breast milk material, homo sapiens)2026-03-01v41 / 12pendingNo
2189gpt-5Chinese human milk samples (dominant china, 1-month postpartum, mammary gland, lactation, human adult stage, female organism, municipality of beijing, milk, urban biome, breast milk material, homo sapiens)2026-03-01v41 / 12pendingNo
2189gpt-5Spanish human milk samples (common homo sapiens, 1-month postpartum, mediterranean, mammary gland, lactation, human adult stage, kingdom of spain, female organism, milk, urban biome, breast milk material, valencia)2026-03-01v41 / 12pendingNo
2189gpt-5Finnish human milk samples (common finland, 1-month postpartum, mammary gland, lactation, human adult stage, female organism, city of turku, milk, urban biome, breast milk material, homo sapiens)2026-03-01v41 / 14pendingNo
2189gpt-5South African human milk samples (common 1-month postpartum, mammary gland, lactation, human adult stage, female organism, cape town, milk, south africa, urban biome, breast milk material, homo sapiens)2026-03-01v41 / 17pendingNo
2189gpt-5South African human milk samples (dominant 1-month postpartum, mammary gland, lactation, human adult stage, female organism, cape town, milk, south africa, urban biome, breast milk material, homo sapiens)2026-03-01v41 / 18pendingNo
2189gpt-5Northern vs Southern latitude human milk microbiome ( high in south africa cape town compared to china finland mediterranean kingdom of spain municipality of beijing city of turku valencia in female organism 1-month postpartum mammary gland lactation human adult stage milk urban biome breast milk material homo sapiens )2026-03-01v41 / 18pendingNo

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