Experiment ID: 2178

Field Description
namethe core gut microbiome of the american cockroach, periplaneta americana, is stable and resilient to dietary shifts (5086554) - gpt-5
proj_id5086554
srasrp075213
date_of_upload01/03/2026 18:48
doi10.1128/aem.01837-16
modelgpt-5
sample_groups_version18
dbbact_id4
dbbact_linkhttps://dbbact.org/exp_info/4
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
periplaneta americana0.500000
honey0.407407
whole wheat diet0.400000
hindgut0.285714
LOWER IN whole wheat diet0.272727
LOWER IN triticum aestivum0.272727
LOWER IN wheat0.272727
LOWER IN honey0.270270
wheat0.250000
dog food diet0.166667
triticum aestivum0.146341
LOWER IN dog food diet0.105263
LOWER IN 0.095238
control0.008584
LOWER IN control0.008475
united states of america0.006645
Fraction of dbbact annotations with this term covered by the query
TermScore
whole wheat diet1.000000
LOWER IN honey1.000000
LOWER IN whole wheat diet0.500000
LOWER IN triticum aestivum0.500000
LOWER IN wheat0.500000
honey0.500000
periplaneta americana0.333333
LOWER IN dog food diet0.333333
dog food diet0.250000
wheat0.250000
LOWER IN 0.200000
hindgut0.166667
triticum aestivum0.090909
LOWER IN control0.004545
control0.004444
united states of america0.003333
Fraction of annotations for the query sequences containing the term
TermScore
laboratory facility1.000000
united states of america1.000000
city of athens1.000000
hindgut1.000000
periplaneta americana1.000000
triticum aestivum0.375000
white flour0.375000
honey0.343750
scombridae0.281250
butter0.281250
whole wheat diet0.250000
wheat0.250000
white flour diet0.250000
honey diet0.218750
LOWER IN white flour diet0.187500
LOWER IN white flour0.187500
LOWER IN whole wheat diet0.187500
LOWER IN triticum aestivum0.187500
LOWER IN wheat0.187500
tuna diet0.156250
butter diet0.156250
LOWER IN honey0.156250
LOWER IN honey diet0.156250
dog food0.125000
dog food diet0.125000
control0.125000
time zero0.125000
starvation0.125000
mixed diet0.125000
LOWER IN scombridae0.093750
LOWER IN butter diet0.093750
LOWER IN tuna diet0.093750
LOWER IN butter0.093750
LOWER IN 0.062500
LOWER IN mixed diet0.062500
LOWER IN starvation0.062500
LOWER IN dog food0.062500
LOWER IN control0.062500
LOWER IN dog food diet0.062500
LOWER IN time zero0.062500
Number of experiments associating the term to the sequence
TermScore
dog food1.000000
laboratory facility1.000000
united states of america1.000000
dog food diet1.000000
control1.000000
city of athens1.000000
hindgut1.000000
time zero1.000000
periplaneta americana1.000000
scombridae1.000000
tuna diet1.000000
whole wheat diet1.000000
triticum aestivum1.000000
wheat1.000000
butter diet1.000000
butter1.000000
LOWER IN white flour diet1.000000
LOWER IN white flour1.000000
LOWER IN whole wheat diet1.000000
LOWER IN honey1.000000
LOWER IN scombridae1.000000
LOWER IN triticum aestivum1.000000
LOWER IN wheat1.000000
LOWER IN butter diet1.000000
LOWER IN tuna diet1.000000
LOWER IN butter1.000000
LOWER IN honey diet1.000000
white flour diet1.000000
honey diet1.000000
LOWER IN 1.000000
LOWER IN mixed diet1.000000
white flour1.000000
honey1.000000
starvation1.000000
mixed diet1.000000
LOWER IN starvation1.000000
LOWER IN dog food1.000000
LOWER IN control1.000000
LOWER IN dog food diet1.000000
LOWER IN time zero1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2178gpt-5Butter diet cockroach hindgut samples (dominant laboratory facility, united states of america, butter diet, city of athens, hindgut, periplaneta americana, butter)2026-03-01v41 / 3pendingNo
2178gpt-5Whole wheat flour diet cockroach hindgut samples (dominant whole wheat diet, laboratory facility, triticum aestivum, united states of america, wheat, city of athens, hindgut, periplaneta americana)2026-03-01v41 / 6pendingNo
2178gpt-5Dog food (time zero) cockroach hindgut samples (dominant dog food, laboratory facility, united states of america, dog food diet, control, city of athens, hindgut, time zero, periplaneta americana)2026-03-01v41 / 7pendingNo
2178gpt-5Honey diet cockroach hindgut samples (dominant laboratory facility, honey, united states of america, city of athens, hindgut, periplaneta americana, honey diet)2026-03-01v41 / 8pendingNo
2178gpt-5Tuna diet cockroach hindgut samples (dominant laboratory facility, scombridae, united states of america, city of athens, hindgut, tuna diet, periplaneta americana)2026-03-01v41 / 9pendingNo
2178gpt-5White flour diet cockroach hindgut samples (dominant white flour diet, white flour, laboratory facility, united states of america, city of athens, hindgut, periplaneta americana)2026-03-01v41 / 9pendingNo
2178gpt-5Starvation cockroach hindgut samples (dominant laboratory facility, united states of america, city of athens, hindgut, periplaneta americana, starvation)2026-03-01v41 / 11pendingNo
2178gpt-5Mixed diet cockroach hindgut samples (dominant white flour, laboratory facility, scombridae, honey, triticum aestivum, united states of america, city of athens, mixed diet, hindgut, , periplaneta americana, butter)2026-03-01v41 / 12pendingNo
2178gpt-5Refined vs whole-grain carbohydrate sources ( high in white flour diet white flour compared to whole wheat diet triticum aestivum wheat in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 18pendingNo
2178gpt-5High-fat vs carbohydrate-rich diets ( high in white flour diet white flour whole wheat diet honey triticum aestivum wheat honey diet compared to butter diet butter in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 22pendingNo
2178gpt-5Starvation vs baseline dog food ( high in starvation compared to dog food control dog food diet time zero in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 40pendingNo
2178gpt-5Diet shift: baseline dog food (time zero) vs single-ingredient diets ( high in white flour diet white flour whole wheat diet honey scombridae triticum aestivum wheat butter diet tuna diet butter honey diet compared to dog food control dog food diet time zero in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 114pendingNo
2178gpt-5Refined vs whole-grain carbohydrate sources ( high in whole wheat diet triticum aestivum wheat compared to white flour diet white flour in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 115pendingNo
2178gpt-5Simple sugar vs starch-based carbohydrate sources ( high in honey honey diet compared to white flour diet white flour whole wheat diet triticum aestivum wheat in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 124pendingNo
2178gpt-5Protein-rich vs carbohydrate-rich diets ( high in white flour diet white flour whole wheat diet honey triticum aestivum wheat honey diet compared to tuna diet scombridae in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 146pendingNo
2178gpt-5Mixed diet vs single-ingredient diets ( high in mixed diet compared to white flour diet whole wheat diet wheat butter diet tuna diet honey diet in white flour laboratory facility scombridae honey triticum aestivum united states of america city of athens hindgut periplaneta americana butter )2026-03-01v41 / 161pendingNo
2178gpt-5Simple sugar vs starch-based carbohydrate sources ( high in white flour diet white flour whole wheat diet triticum aestivum wheat compared to honey honey diet in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 162pendingNo
2178gpt-5High-fat vs carbohydrate-rich diets ( high in butter diet butter compared to white flour diet white flour whole wheat diet honey triticum aestivum wheat honey diet in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 175pendingNo
2178gpt-5Energy deprivation effect: starvation vs mixed diet ( high in white flour honey scombridae triticum aestivum mixed diet butter compared to starvation in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 209pendingNo
2178gpt-5Starvation vs baseline dog food ( high in dog food control dog food diet time zero compared to starvation in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 315pendingNo
2178gpt-5Energy deprivation effect: starvation vs mixed diet ( high in starvation compared to white flour honey scombridae triticum aestivum mixed diet butter in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 397pendingNo
2178gpt-5Protein-rich vs carbohydrate-rich diets ( high in tuna diet scombridae compared to white flour diet white flour whole wheat diet honey triticum aestivum wheat honey diet in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 436pendingNo
2178gpt-5Mixed diet cockroach hindgut samples (common white flour, laboratory facility, scombridae, honey, triticum aestivum, united states of america, city of athens, mixed diet, hindgut, , periplaneta americana, butter)2026-03-01v41 / 513pendingNo
2178gpt-5Starvation cockroach hindgut samples (common laboratory facility, united states of america, city of athens, hindgut, periplaneta americana, starvation)2026-03-01v41 / 552pendingNo
2178gpt-5White flour diet cockroach hindgut samples (common white flour diet, white flour, laboratory facility, united states of america, city of athens, hindgut, periplaneta americana)2026-03-01v41 / 613pendingNo
2178gpt-5Honey diet cockroach hindgut samples (common laboratory facility, honey, united states of america, city of athens, hindgut, periplaneta americana, honey diet)2026-03-01v41 / 640pendingNo
2178gpt-5Mixed diet vs single-ingredient diets ( high in white flour diet whole wheat diet wheat butter diet tuna diet honey diet compared to mixed diet in white flour laboratory facility scombridae honey triticum aestivum united states of america city of athens hindgut periplaneta americana butter )2026-03-01v41 / 677pendingNo
2178gpt-5Diet shift: baseline dog food (time zero) vs single-ingredient diets ( high in dog food control dog food diet time zero compared to white flour diet white flour whole wheat diet honey scombridae triticum aestivum wheat butter diet tuna diet butter honey diet in laboratory facility united states of america city of athens hindgut periplaneta americana )2026-03-01v41 / 715pendingNo
2178gpt-5Butter diet cockroach hindgut samples (common laboratory facility, united states of america, butter diet, city of athens, hindgut, periplaneta americana, butter)2026-03-01v41 / 728pendingNo
2178gpt-5Whole wheat flour diet cockroach hindgut samples (common whole wheat diet, laboratory facility, triticum aestivum, united states of america, wheat, city of athens, hindgut, periplaneta americana)2026-03-01v41 / 730pendingNo
2178gpt-5Tuna diet cockroach hindgut samples (common laboratory facility, scombridae, united states of america, city of athens, hindgut, tuna diet, periplaneta americana)2026-03-01v41 / 738pendingNo
2178gpt-5Dog food (time zero) cockroach hindgut samples (common dog food, laboratory facility, united states of america, dog food diet, control, city of athens, hindgut, time zero, periplaneta americana)2026-03-01v41 / 776pendingNo

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