Experiment ID: 2173

Field Description
namedynamics of the fecal microbiome in patients with recurrent and nonrecurrent clostridium difficile infection (4847246) - gpt-5
proj_id4847246
sraprjna307992
date_of_upload01/03/2026 18:31
doi10.1186/s13073-016-0298-8
modelgpt-5
sample_groups_version18
dbbact_id94
dbbact_linkhttps://dbbact.org/exp_info/94
needs_manual_reviewfalse

Annotations for experiment:

term enrichment score
TermScore
clostridium difficile colitis0.400000
hospital0.181818
human adult stage0.045455
united states of america0.006645
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
clostridium difficile colitis0.250000
hospital0.100000
human adult stage0.023256
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
city of ann arbor1.000000
human adult stage1.000000
hospital1.000000
clostridium difficile colitis1.000000
feces1.000000
homo sapiens1.000000
united states of america1.000000
idsa severity criteria0.500000
non-severe disease0.250000
severe disease0.250000
recurrent0.250000
reinfection0.250000
nonrecurrent0.250000
LOWER IN recurrent0.083333
LOWER IN reinfection0.083333
LOWER IN severe disease0.083333
LOWER IN nonrecurrent0.083333
LOWER IN non-severe disease0.083333
Number of experiments associating the term to the sequence
TermScore
city of ann arbor1.000000
human adult stage1.000000
hospital1.000000
non-severe disease1.000000
clostridium difficile colitis1.000000
idsa severity criteria1.000000
feces1.000000
homo sapiens1.000000
united states of america1.000000
severe disease1.000000
recurrent1.000000
reinfection1.000000
nonrecurrent1.000000
LOWER IN recurrent1.000000
LOWER IN reinfection1.000000
LOWER IN severe disease1.000000
LOWER IN nonrecurrent1.000000
LOWER IN non-severe disease1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2173gpt-5Recurrent vs nonrecurrent CDI (risk of recurrence) ( high in recurrent reinfection compared to nonrecurrent in city of ann arbor human adult stage hospital clostridium difficile colitis feces homo sapiens united states of america )2026-03-01v41 / 1pendingNo
2173gpt-5Severe vs non-severe CDI (IDSA severity strata) ( high in severe disease compared to non-severe disease in city of ann arbor human adult stage hospital clostridium difficile colitis idsa severity criteria feces homo sapiens united states of america )2026-03-01v41 / 1pendingNo
2173gpt-5Severe vs non-severe CDI (IDSA severity strata) ( high in non-severe disease compared to severe disease in city of ann arbor human adult stage hospital clostridium difficile colitis idsa severity criteria feces homo sapiens united states of america )2026-03-01v41 / 4pendingNo
2173gpt-5Severe CDI fecal samples (IDSA criteria) (common city of ann arbor, human adult stage, hospital, clostridium difficile colitis, idsa severity criteria, severe disease, feces, homo sapiens, united states of america)2026-03-01v41 / 7pendingNo
2173gpt-5Recurrent CDI patient fecal samples + Reinfected CDI patient fecal samples (common city of ann arbor, recurrent, human adult stage, hospital, reinfection, clostridium difficile colitis, feces, homo sapiens, united states of america)2026-03-01v41 / 8pendingNo
2173gpt-5Nonrecurrent CDI patient fecal samples (common city of ann arbor, human adult stage, hospital, nonrecurrent, clostridium difficile colitis, feces, homo sapiens, united states of america)2026-03-01v41 / 10pendingNo
2173gpt-5Non-severe CDI fecal samples (IDSA criteria) (common city of ann arbor, human adult stage, hospital, non-severe disease, clostridium difficile colitis, idsa severity criteria, feces, homo sapiens, united states of america)2026-03-01v41 / 11pendingNo
2173gpt-5Recurrent vs nonrecurrent CDI (risk of recurrence) ( high in nonrecurrent compared to recurrent reinfection in city of ann arbor human adult stage hospital clostridium difficile colitis feces homo sapiens united states of america )2026-03-01v41 / 17pendingNo
2173gpt-5Nonrecurrent CDI patient fecal samples (dominant city of ann arbor, human adult stage, hospital, nonrecurrent, clostridium difficile colitis, feces, homo sapiens, united states of america)2026-03-01v41 / 18pendingNo
2173gpt-5Recurrent CDI patient fecal samples + Reinfected CDI patient fecal samples (dominant city of ann arbor, recurrent, human adult stage, hospital, reinfection, clostridium difficile colitis, feces, homo sapiens, united states of america)2026-03-01v41 / 21pendingNo
2173gpt-5Severe CDI fecal samples (IDSA criteria) (dominant city of ann arbor, human adult stage, hospital, clostridium difficile colitis, idsa severity criteria, severe disease, feces, homo sapiens, united states of america)2026-03-01v41 / 22pendingNo
2173gpt-5Non-severe CDI fecal samples (IDSA criteria) (dominant city of ann arbor, human adult stage, hospital, non-severe disease, clostridium difficile colitis, idsa severity criteria, feces, homo sapiens, united states of america)2026-03-01v41 / 24pendingNo

Problems / suggestions? Please visit the dbBact forum