Experiment ID: 2153

Field Description
nameunique genital microbiota in male lichen sclerosus urethral stricture associated with urine exposure (11605853) - gpt-5
proj_id11605853
sraprjna843054
date_of_upload15/01/2026 02:04
doi10.1186/s12866-024-03659-w
modelgpt-5
sample_groups_version16
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
penis0.400000
human middle aged stage0.400000
municipality of shanghai0.400000
urine0.285714
LOWER IN urine0.250000
LOWER IN penis0.250000
hospital0.181818
male organism0.111111
china0.009390
control0.008850
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN urine0.500000
LOWER IN penis0.500000
penis0.333333
human middle aged stage0.250000
municipality of shanghai0.250000
urine0.200000
hospital0.100000
male organism0.058824
china0.004717
control0.004444
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
hospital1.000000
china1.000000
male organism1.000000
human middle aged stage1.000000
urine exposure1.000000
urethral stricture1.000000
balanitis xerotica obliterans1.000000
control1.000000
homo sapiens1.000000
municipality of shanghai1.000000
skin of prepuce of penis0.500000
prepuce of penis0.500000
prepuce0.500000
penis0.500000
urine0.500000
midstream urine0.500000
renal system0.500000
LOWER IN urine0.166667
LOWER IN midstream urine0.166667
LOWER IN renal system0.166667
LOWER IN skin of prepuce of penis0.166667
LOWER IN prepuce of penis0.166667
LOWER IN prepuce0.166667
LOWER IN penis0.166667
Number of experiments associating the term to the sequence
TermScore
skin of prepuce of penis1.000000
prepuce of penis1.000000
prepuce1.000000
penis1.000000
LOWER IN urine1.000000
LOWER IN midstream urine1.000000
LOWER IN renal system1.000000
hospital1.000000
china1.000000
male organism1.000000
human middle aged stage1.000000
urine exposure1.000000
urethral stricture1.000000
balanitis xerotica obliterans1.000000
control1.000000
homo sapiens1.000000
municipality of shanghai1.000000
urine1.000000
midstream urine1.000000
renal system1.000000
LOWER IN skin of prepuce of penis1.000000
LOWER IN prepuce of penis1.000000
LOWER IN prepuce1.000000
LOWER IN penis1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2153gpt-5LSUS male urine samples (16S) + Non-LSUS male urine samples (16S) (dominant urine, midstream urine, hospital, male organism, china, renal system, human middle aged stage, urine exposure, urethral stricture, balanitis xerotica obliterans, control, homo sapiens, municipality of shanghai)2026-01-15v41 / 6pendingNo
2153gpt-5LSUS male balanopreputial skin swab samples (16S) + Non-LSUS male balanopreputial skin swab samples (16S) (dominant skin of prepuce of penis, prepuce, hospital, male organism, china, penis, prepuce of penis, human middle aged stage, urine exposure, urethral stricture, balanitis xerotica obliterans, control, homo sapiens, municipality of shanghai)2026-01-15v41 / 14pendingNo
2153gpt-5Within LSUS: skin vs urine microbiome niche differences ( high in urine midstream urine renal system compared to skin of prepuce of penis prepuce of penis prepuce penis in hospital china male organism human middle aged stage urine exposure urethral stricture balanitis xerotica obliterans control homo sapiens municipality of shanghai )2026-01-15v41 / 28pendingNo
2153gpt-5LSUS male balanopreputial skin swab samples (16S) + Non-LSUS male balanopreputial skin swab samples (16S) (common skin of prepuce of penis, prepuce, hospital, male organism, china, penis, prepuce of penis, human middle aged stage, urine exposure, urethral stricture, balanitis xerotica obliterans, control, homo sapiens, municipality of shanghai)2026-01-15v41 / 41pendingNo
2153gpt-5LSUS male urine samples (16S) + Non-LSUS male urine samples (16S) (common urine, midstream urine, hospital, male organism, china, renal system, human middle aged stage, urine exposure, urethral stricture, balanitis xerotica obliterans, control, homo sapiens, municipality of shanghai)2026-01-15v41 / 57pendingNo
2153gpt-5Within LSUS: skin vs urine microbiome niche differences ( high in skin of prepuce of penis prepuce of penis prepuce penis compared to urine midstream urine renal system in hospital china male organism human middle aged stage urine exposure urethral stricture balanitis xerotica obliterans control homo sapiens municipality of shanghai )2026-01-15v41 / 73pendingNo

Problems / suggestions? Please visit the dbBact forum