Experiment ID: 214

Field Description
nameinteractions between gut microbiota, host genetics and diet in the development of metabolic syndrome
sraerp010838
sraprjeb9702
datamd566087ba7baad7a121a4df88d5d5ddf94
mapmd579aea80c522c27daffb0f889acb26896

Annotations for experiment:

term enrichment score
TermScore
strain 129s0.378378
LOWER IN c57bl/6j0.153846
jackson laboratories0.109890
nih 31m chow0.105263
LOWER IN nih 31m chow0.105263
LOWER IN strain 129s0.105263
strain s1290.105263
LOWER IN strain s1290.105263
LOWER IN taconic farms0.095238
taconic farms0.086957
LOWER IN jackson laboratories0.086957
c57bl/6j0.077922
mouse chow0.063927
high fat diet0.063927
LOWER IN high fat diet0.046512
LOWER IN mouse chow0.040816
diet0.036364
mouse0.015152
mus musculus0.013699
research facility0.005236
united states of america0.003333
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
nih 31m chow0.333333
LOWER IN nih 31m chow0.333333
strain 129s0.333333
LOWER IN strain 129s0.333333
strain s1290.333333
LOWER IN strain s1290.333333
LOWER IN c57bl/6j0.200000
LOWER IN taconic farms0.200000
taconic farms0.142857
LOWER IN jackson laboratories0.142857
jackson laboratories0.066667
c57bl/6j0.043478
LOWER IN high fat diet0.037037
mouse chow0.034483
high fat diet0.034483
LOWER IN mouse chow0.030303
diet0.021277
mouse0.007634
mus musculus0.006897
research facility0.002625
united states of america0.001669
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
mouse1.000000
mus musculus1.000000
feces1.000000
united states of america1.000000
research facility1.000000
mouse chow0.437500
high fat diet0.437500
strain 129s0.437500
c57bl/6j0.375000
jackson laboratories0.312500
diet0.125000
LOWER IN c57bl/6j0.125000
nih 31m chow0.062500
LOWER IN high fat diet0.062500
LOWER IN mouse chow0.062500
LOWER IN nih 31m chow0.062500
taconic farms0.062500
LOWER IN jackson laboratories0.062500
LOWER IN taconic farms0.062500
LOWER IN strain 129s0.062500
strain s1290.062500
LOWER IN strain s1290.062500
Number of experiments associating the term to the sequence
TermScore
mouse1.000000
mus musculus1.000000
feces1.000000
united states of america1.000000
research facility1.000000
diet1.000000
nih 31m chow1.000000
LOWER IN high fat diet1.000000
mouse chow1.000000
high fat diet1.000000
LOWER IN mouse chow1.000000
LOWER IN nih 31m chow1.000000
strain 129s1.000000
taconic farms1.000000
LOWER IN jackson laboratories1.000000
LOWER IN c57bl/6j1.000000
jackson laboratories1.000000
LOWER IN taconic farms1.000000
c57bl/6j1.000000
LOWER IN strain 129s1.000000
strain s1291.000000
LOWER IN strain s1291.000000
Exp. ID User ID Description Date Region Sequences Status Flag
214amnondominant mouse, mus musculus, feces, united states of america, research facility, strain 129s, mouse chow2017-10-23v41 / 13approvedNo
214amnondominant mouse, mus musculus, feces, united states of america, research facility, c57bl/6j, mouse chow2017-10-23v41 / 14approvedNo
214amnondominant mouse, mus musculus, feces, united states of america, research facility, high fat diet, c57bl/6j2017-10-23v41 / 16approvedNo
214amnondominant mouse, mus musculus, feces, united states of america, research facility, strain 129s, high fat diet2017-10-23v41 / 18approvedNo
214amnoncommon mouse, mus musculus, feces, united states of america, research facility, c57bl/6j, mouse chow2017-10-23v41 / 60approvedNo
214amnoncommon mouse, mus musculus, feces, united states of america, research facility, high fat diet, c57bl/6j2017-10-23v41 / 62approvedNo
214amnoncommon mouse, mus musculus, feces, united states of america, research facility, strain 129s, high fat diet2017-10-23v41 / 89approvedNo
214amnoncommon mouse, mus musculus, feces, united states of america, research facility, strain 129s, mouse chow2017-10-23v41 / 95approvedNo
214amnon high in c57bl/6j compared to strain s129 in mouse mus musculus feces united states of america research facility jackson laboratories high fat diet 2017-10-23v41 / 113approvedNo
214amnon high in strain s129 compared to c57bl/6j in mouse mus musculus feces united states of america research facility jackson laboratories high fat diet 2017-10-23v41 / 148approvedNo
214amnon high in c57bl/6j compared to strain 129s in feces united states of america research facility mus musculus mouse jackson laboratories mouse chow 2017-10-23v41 / 154approvedNo
214amnonhigher in mice from jackson laboratories compared to taconic farms ( high in jackson laboratories compared to taconic farms in mouse mus musculus feces united states of america research facility strain 129s )2017-10-23v41 / 181approvedNo
214amnon high in strain 129s compared to c57bl/6j in feces united states of america research facility mus musculus mouse jackson laboratories mouse chow 2017-10-23v41 / 207approvedNo
214amnonlower in mice from jackson laboratories compared to taconic farms ( high in taconic farms compared to jackson laboratories in mouse mus musculus feces united states of america research facility strain 129s )2017-10-23v41 / 232approvedNo
214amnon high in diet high fat diet compared to mouse chow nih 31m chow in mouse mus musculus feces united states of america research facility 2017-10-23v41 / 255approvedNo
214amnon high in diet nih 31m chow mouse chow compared to high fat diet in mouse mus musculus feces united states of america research facility 2017-10-23v41 / 495approvedNo

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