Experiment ID: 2133

Field Description
namesuccession of rumen microbiota and metabolites across different reproductive periods in different sheep breeds and their impact on the growth and development of offspring lambs (11397069) - gpt-5
proj_id11397069
sraprjna1060421
date_of_upload29/12/2025 02:46
doi10.1186/s40168-024-01892-z
modelgpt-5
sample_groups_version15
dbbact_id1115
dbbact_linkhttps://dbbact.org/exp_info/1115
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
suffolk sheep0.541667
hu sheep0.450000
non-pregnant0.367347
LOWER IN hu sheep0.312500
LOWER IN suffolk sheep0.312500
LOWER IN pregnancy0.235294
sheep0.125000
ovis aries0.111111
pregnancy0.107143
female organism0.100000
LOWER IN non-pregnant0.080000
rumen0.071429
farm0.045455
china0.009390
Fraction of dbbact annotations with this term covered by the query
TermScore
suffolk sheep0.500000
hu sheep0.500000
LOWER IN hu sheep0.500000
LOWER IN suffolk sheep0.500000
non-pregnant0.333333
LOWER IN pregnancy0.333333
LOWER IN non-pregnant0.333333
sheep0.066667
pregnancy0.066667
ovis aries0.058824
female organism0.052632
rumen0.037037
farm0.023256
china0.004717
Fraction of annotations for the query sequences containing the term
TermScore
farm1.000000
rumen1.000000
lanzhou city prefecture1.000000
sheep1.000000
ewe1.000000
female organism1.000000
china1.000000
gansu province1.000000
ovis aries1.000000
suffolk sheep0.590909
non-pregnant0.409091
hu sheep0.409091
lactation0.272727
pregnancy0.272727
LOWER IN hu sheep0.227273
LOWER IN suffolk sheep0.227273
LOWER IN lactation0.181818
LOWER IN pregnancy0.181818
LOWER IN non-pregnant0.045455
Number of experiments associating the term to the sequence
TermScore
lactation1.000000
farm1.000000
rumen1.000000
lanzhou city prefecture1.000000
sheep1.000000
ewe1.000000
female organism1.000000
china1.000000
gansu province1.000000
suffolk sheep1.000000
ovis aries1.000000
non-pregnant1.000000
hu sheep1.000000
pregnancy1.000000
LOWER IN hu sheep1.000000
LOWER IN lactation1.000000
LOWER IN suffolk sheep1.000000
LOWER IN pregnancy1.000000
LOWER IN non-pregnant1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2133gpt-5Hu sheep rumen - non-pregnancy (HN) (dominant farm, rumen, gansu province, lanzhou city prefecture, sheep, ewe, female organism, china, non-pregnant, ovis aries, hu sheep)2025-12-29v31 / 6pendingNo
2133gpt-5Suffolk sheep rumen - lactation (SL) (dominant lactation, farm, rumen, lanzhou city prefecture, sheep, ewe, female organism, china, gansu province, suffolk sheep, ovis aries)2025-12-29v31 / 7pendingNo
2133gpt-5Hu sheep rumen - pregnancy (HP) + Hu sheep rumen - lactation (HL) (dominant farm, rumen, lanzhou city prefecture, sheep, ewe, female organism, china, gansu province, ovis aries, hu sheep)2025-12-29v31 / 8pendingNo
2133gpt-5Suffolk sheep rumen - pregnancy (SP) (dominant farm, rumen, lanzhou city prefecture, sheep, pregnancy, ewe, female organism, china, gansu province, suffolk sheep, ovis aries)2025-12-29v31 / 9pendingNo
2133gpt-5Suffolk sheep rumen - non-pregnancy (SN) (dominant farm, rumen, gansu province, lanzhou city prefecture, sheep, ewe, female organism, china, non-pregnant, suffolk sheep, ovis aries)2025-12-29v31 / 11pendingNo
2133gpt-5Overall physiological state effect in Suffolk sheep (reproductive stages vs non-pregnancy) ( high in lactation pregnancy compared to non-pregnant in farm rumen lanzhou city prefecture sheep ewe china gansu province suffolk sheep female organism ovis aries )2025-12-29v31 / 21pendingNo
2133gpt-5Overall physiological state effect in Suffolk sheep (reproductive stages vs non-pregnancy) ( high in non-pregnant compared to lactation pregnancy in farm rumen lanzhou city prefecture sheep ewe china gansu province suffolk sheep female organism ovis aries )2025-12-29v31 / 62pendingNo
2133gpt-5Breed effect during non-pregnancy (Hu vs Suffolk) ( high in suffolk sheep compared to hu sheep in farm rumen gansu province lanzhou city prefecture sheep ewe china non-pregnant female organism ovis aries )2025-12-29v31 / 102pendingNo
2133gpt-5Breed effect during pregnancy (Hu vs Suffolk) ( high in hu sheep compared to suffolk sheep pregnancy in farm rumen lanzhou city prefecture sheep ewe china gansu province female organism ovis aries )2025-12-29v31 / 115pendingNo
2133gpt-5Breed effect during non-pregnancy (Hu vs Suffolk) ( high in hu sheep compared to suffolk sheep in farm rumen gansu province lanzhou city prefecture sheep ewe china non-pregnant female organism ovis aries )2025-12-29v31 / 169pendingNo
2133gpt-5Breed effect during pregnancy (Hu vs Suffolk) ( high in suffolk sheep pregnancy compared to hu sheep in farm rumen lanzhou city prefecture sheep ewe china gansu province female organism ovis aries )2025-12-29v31 / 183pendingNo
2133gpt-5Breed effect during lactation (Hu vs Suffolk) ( high in hu sheep compared to lactation suffolk sheep in farm rumen lanzhou city prefecture sheep ewe china gansu province female organism ovis aries )2025-12-29v31 / 232pendingNo
2133gpt-5Baseline breed differences across all states (Hu vs Suffolk; all stages combined) ( high in lactation suffolk sheep pregnancy compared to hu sheep in farm rumen gansu province lanzhou city prefecture sheep ewe china non-pregnant female organism ovis aries )2025-12-29v31 / 405pendingNo
2133gpt-5Baseline breed differences across all states (Hu vs Suffolk; all stages combined) ( high in hu sheep compared to lactation suffolk sheep pregnancy in farm rumen gansu province lanzhou city prefecture sheep ewe china non-pregnant female organism ovis aries )2025-12-29v31 / 433pendingNo
2133gpt-5Breed differences across reproductive stages (Hu vs Suffolk; pregnancy and lactation combined) ( high in hu sheep compared to lactation suffolk sheep pregnancy in farm rumen lanzhou city prefecture sheep ewe china gansu province female organism ovis aries )2025-12-29v31 / 485pendingNo
2133gpt-5Breed effect during lactation (Hu vs Suffolk) ( high in lactation suffolk sheep compared to hu sheep in farm rumen lanzhou city prefecture sheep ewe china gansu province female organism ovis aries )2025-12-29v31 / 503pendingNo
2133gpt-5Breed differences across reproductive stages (Hu vs Suffolk; pregnancy and lactation combined) ( high in lactation suffolk sheep pregnancy compared to hu sheep in farm rumen lanzhou city prefecture sheep ewe china gansu province female organism ovis aries )2025-12-29v31 / 573pendingNo
2133gpt-5Hu sheep rumen - pregnancy (HP) + Hu sheep rumen - lactation (HL) (common farm, rumen, lanzhou city prefecture, sheep, ewe, female organism, china, gansu province, ovis aries, hu sheep)2025-12-29v31 / 860pendingNo
2133gpt-5Suffolk sheep rumen - non-pregnancy (SN) (common farm, rumen, gansu province, lanzhou city prefecture, sheep, ewe, female organism, china, non-pregnant, suffolk sheep, ovis aries)2025-12-29v31 / 877pendingNo
2133gpt-5Suffolk sheep rumen - pregnancy (SP) (common farm, rumen, lanzhou city prefecture, sheep, pregnancy, ewe, female organism, china, gansu province, suffolk sheep, ovis aries)2025-12-29v31 / 1004pendingNo
2133gpt-5Hu sheep rumen - non-pregnancy (HN) (common farm, rumen, gansu province, lanzhou city prefecture, sheep, ewe, female organism, china, non-pregnant, ovis aries, hu sheep)2025-12-29v31 / 1174pendingNo
2133gpt-5Suffolk sheep rumen - lactation (SL) (common lactation, farm, rumen, lanzhou city prefecture, sheep, ewe, female organism, china, gansu province, suffolk sheep, ovis aries)2025-12-29v31 / 1288pendingNo

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