Experiment ID: 2121

Field Description
nameprofile of gut microbiota in patients with traumatic thoracic spinal cord injury and its clinical implications: a case-control study in a rehabilitation setting (8806552) - gpt-5
proj_id8806552
sraprjna669472
date_of_upload29/12/2025 02:28
doi10.1080/21655979.2021.1955543
modelgpt-5
sample_groups_version15
dbbact_id911
dbbact_linkhttps://dbbact.org/exp_info/911
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
spinal cord injury0.538462
LOWER IN hospital0.400000
nanjing city prefecture0.400000
LOWER IN spinal cord injury0.333333
jiangsu province0.222222
hospital0.185185
human adult stage0.045455
china0.009390
LOWER IN control0.008929
control0.008795
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN hospital1.000000
LOWER IN spinal cord injury0.500000
spinal cord injury0.500000
nanjing city prefecture0.250000
jiangsu province0.125000
hospital0.100000
human adult stage0.023256
china0.004717
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
hospital1.250000
homo sapiens1.000000
china1.000000
feces1.000000
nanjing city prefecture1.000000
jiangsu province1.000000
human adult stage1.000000
neurogenic bowel0.583333
bowel dysfunction0.583333
2-12 months post-injury0.583333
spinal cord injury0.583333
injury0.583333
control0.416667
medical examination0.416667
LOWER IN neurogenic bowel0.250000
LOWER IN hospital0.250000
LOWER IN bowel dysfunction0.250000
LOWER IN 2-12 months post-injury0.250000
LOWER IN spinal cord injury0.250000
LOWER IN injury0.250000
LOWER IN control0.250000
LOWER IN medical examination0.250000
Number of experiments associating the term to the sequence
TermScore
control1.000000
medical examination1.000000
LOWER IN neurogenic bowel1.000000
LOWER IN hospital1.000000
LOWER IN bowel dysfunction1.000000
LOWER IN 2-12 months post-injury1.000000
LOWER IN spinal cord injury1.000000
LOWER IN injury1.000000
homo sapiens1.000000
hospital1.000000
china1.000000
feces1.000000
nanjing city prefecture1.000000
jiangsu province1.000000
human adult stage1.000000
neurogenic bowel1.000000
bowel dysfunction1.000000
2-12 months post-injury1.000000
spinal cord injury1.000000
injury1.000000
LOWER IN control1.000000
LOWER IN medical examination1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2121gpt-5Healthy control human stool samples (16S) (dominant homo sapiens, medical examination, hospital, china, control, feces, nanjing city prefecture, jiangsu province, human adult stage)2025-12-29v41 / 21pendingNo
2121gpt-5SCI (complete + incomplete) vs healthy controls (stool, 16S) ( high in neurogenic bowel hospital bowel dysfunction 2-12 months post-injury spinal cord injury injury compared to control medical examination in homo sapiens hospital china feces nanjing city prefecture jiangsu province human adult stage )2025-12-29v41 / 21pendingNo
2121gpt-5Incomplete thoracic SCI vs healthy controls (stool, 16S) ( high in neurogenic bowel hospital bowel dysfunction 2-12 months post-injury spinal cord injury injury compared to control medical examination in homo sapiens hospital china feces nanjing city prefecture jiangsu province human adult stage )2025-12-29v41 / 21pendingNo
2121gpt-5Complete thoracic SCI vs healthy controls (stool, 16S) ( high in neurogenic bowel hospital bowel dysfunction 2-12 months post-injury spinal cord injury injury compared to control medical examination in homo sapiens hospital china feces nanjing city prefecture jiangsu province human adult stage )2025-12-29v41 / 24pendingNo
2121gpt-5Complete thoracic SCI human stool samples (16S) (dominant homo sapiens, neurogenic bowel, hospital, china, bowel dysfunction, feces, 2-12 months post-injury, nanjing city prefecture, jiangsu province, human adult stage, spinal cord injury, injury)2025-12-29v41 / 26pendingNo
2121gpt-5Incomplete thoracic SCI human stool samples (16S) (dominant homo sapiens, neurogenic bowel, hospital, china, bowel dysfunction, feces, 2-12 months post-injury, nanjing city prefecture, jiangsu province, human adult stage, spinal cord injury, injury)2025-12-29v41 / 27pendingNo
2121gpt-5Incomplete thoracic SCI human stool samples (16S) (common homo sapiens, neurogenic bowel, hospital, china, bowel dysfunction, feces, 2-12 months post-injury, nanjing city prefecture, jiangsu province, human adult stage, spinal cord injury, injury)2025-12-29v41 / 43pendingNo
2121gpt-5Incomplete thoracic SCI vs healthy controls (stool, 16S) ( high in control medical examination compared to neurogenic bowel hospital bowel dysfunction 2-12 months post-injury spinal cord injury injury in homo sapiens hospital china feces nanjing city prefecture jiangsu province human adult stage )2025-12-29v41 / 46pendingNo
2121gpt-5Complete thoracic SCI human stool samples (16S) (common homo sapiens, neurogenic bowel, hospital, china, bowel dysfunction, feces, 2-12 months post-injury, nanjing city prefecture, jiangsu province, human adult stage, spinal cord injury, injury)2025-12-29v41 / 51pendingNo
2121gpt-5Complete thoracic SCI vs healthy controls (stool, 16S) ( high in control medical examination compared to neurogenic bowel hospital bowel dysfunction 2-12 months post-injury spinal cord injury injury in homo sapiens hospital china feces nanjing city prefecture jiangsu province human adult stage )2025-12-29v41 / 65pendingNo
2121gpt-5Healthy control human stool samples (16S) (common homo sapiens, medical examination, hospital, china, control, feces, nanjing city prefecture, jiangsu province, human adult stage)2025-12-29v41 / 81pendingNo
2121gpt-5SCI (complete + incomplete) vs healthy controls (stool, 16S) ( high in control medical examination compared to neurogenic bowel hospital bowel dysfunction 2-12 months post-injury spinal cord injury injury in homo sapiens hospital china feces nanjing city prefecture jiangsu province human adult stage )2025-12-29v41 / 89pendingNo

Problems / suggestions? Please visit the dbBact forum