Experiment ID: 2113

Field Description
namecharacterization of rumen microbiota of two sheep breeds supplemented with direct-fed lactic acid bacteria (7843511) - gpt-5
proj_id7843511
sraprjna578022
date_of_upload29/12/2025 02:11
doi10.3389/fvets.2020.570074
modelgpt-5
sample_groups_version15
dbbact_id929
dbbact_linkhttps://dbbact.org/exp_info/929
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
gauteng province0.666667
feed supplement diet0.352941
probiotic0.347826
damara sheep0.214286
meatmaster sheep0.214286
ovis aries0.111111
LOWER IN meatmaster sheep0.083333
LOWER IN damara sheep0.083333
rumen0.071429
farm0.045455
Fraction of dbbact annotations with this term covered by the query
TermScore
damara sheep0.500000
LOWER IN meatmaster sheep0.500000
feed supplement diet0.500000
gauteng province0.500000
meatmaster sheep0.500000
LOWER IN damara sheep0.500000
probiotic0.333333
ovis aries0.058824
rumen0.037037
farm0.023256
Exp. ID User ID Description Date Region Sequences Status Flag
2113gpt-5Rumen samples collected on 2017-10-20 (dominant ovis aries, post-trial sampling, irene, 2017-10-20 collection date, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 3pendingNo
2113gpt-5Antibiotic treated rumen samples + Negative control rumen samples (no antibiotics, no probiotics) (dominant ovis aries, irene, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 3pendingNo
2113gpt-5Meatmaster sheep rumen samples (16S) (dominant ovis aries, irene, feed supplement diet, meatmaster sheep, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 4pendingNo
2113gpt-5Damara sheep rumen samples (16S) (dominant ovis aries, irene, feed supplement diet, farm, gauteng province, damara sheep, rumen, republic of south africa)2025-12-29v31 / 5pendingNo
2113gpt-5Lactobacillus rhamnosus SCH (PT9) treated rumen samples (dominant lactobacillus rhamnosus pt9, ovis aries, irene, probiotic, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 5pendingNo
2113gpt-5Combination probiotic (SCH + AF3G) treated rumen samples (dominant lactobacillus rhamnosus pt9, combination treatment, ovis aries, lactobacillus rhamnosus pt10, irene, probiotic, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 5pendingNo
2113gpt-5Lactobacillus rhamnosus SCH (PT9) treated rumen samples + Lactobacillus rhamnosus AF3G (PT10) treated rumen samples + Combination probiotic (SCH + AF3G) treated rumen samples + Negative control rumen samples (no antibiotics, no probiotics) (dominant ovis aries, irene, probiotic, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 5pendingNo
2113gpt-5Lactobacillus rhamnosus AF3G (PT10) treated rumen samples (dominant ovis aries, lactobacillus rhamnosus pt10, irene, probiotic, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 6pendingNo
2113gpt-5Rumen samples collected on 2017-09-19 (dominant pre-trial sampling, ovis aries, irene, farm, gauteng province, rumen, republic of south africa, 2017-09-19 collection date)2025-12-29v31 / 6pendingNo
2113gpt-5Temporal stability of rumen microbiome: September vs October collection ( high in pre-trial sampling 2017-09-19 collection date compared to post-trial sampling 2017-10-20 collection date in ovis aries irene farm gauteng province rumen republic of south africa )2025-12-29v31 / 19pendingNo
2113gpt-5Temporal stability of rumen microbiome: September vs October collection ( high in post-trial sampling 2017-10-20 collection date compared to pre-trial sampling 2017-09-19 collection date in ovis aries irene farm gauteng province rumen republic of south africa )2025-12-29v31 / 78pendingNo
2113gpt-5Rumen samples collected on 2017-09-19 (common pre-trial sampling, ovis aries, irene, farm, gauteng province, rumen, republic of south africa, 2017-09-19 collection date)2025-12-29v31 / 379pendingNo
2113gpt-5Lactobacillus rhamnosus SCH (PT9) treated rumen samples + Lactobacillus rhamnosus AF3G (PT10) treated rumen samples + Combination probiotic (SCH + AF3G) treated rumen samples + Negative control rumen samples (no antibiotics, no probiotics) (common ovis aries, irene, probiotic, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 398pendingNo
2113gpt-5Antibiotic treated rumen samples + Negative control rumen samples (no antibiotics, no probiotics) (common ovis aries, irene, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 406pendingNo
2113gpt-5Meatmaster sheep rumen samples (16S) (common ovis aries, irene, feed supplement diet, meatmaster sheep, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 431pendingNo
2113gpt-5Lactobacillus rhamnosus AF3G (PT10) treated rumen samples (common ovis aries, lactobacillus rhamnosus pt10, irene, probiotic, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 472pendingNo
2113gpt-5Rumen samples collected on 2017-10-20 (common ovis aries, post-trial sampling, irene, 2017-10-20 collection date, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 495pendingNo
2113gpt-5Lactobacillus rhamnosus SCH (PT9) treated rumen samples (common lactobacillus rhamnosus pt9, ovis aries, irene, probiotic, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 553pendingNo
2113gpt-5Damara sheep rumen samples (16S) (common ovis aries, irene, feed supplement diet, farm, gauteng province, damara sheep, rumen, republic of south africa)2025-12-29v31 / 579pendingNo
2113gpt-5Combination probiotic (SCH + AF3G) treated rumen samples (common lactobacillus rhamnosus pt9, combination treatment, ovis aries, lactobacillus rhamnosus pt10, irene, probiotic, farm, gauteng province, rumen, republic of south africa)2025-12-29v31 / 644pendingNo
2113gpt-5Breed-associated rumen microbiome differences: Damara vs Meatmaster (16S, rumen contents) ( high in meatmaster sheep compared to damara sheep in ovis aries irene feed supplement diet farm gauteng province rumen republic of south africa )2025-12-29v31 / 738pendingNo
2113gpt-5Breed-associated rumen microbiome differences: Damara vs Meatmaster (16S, rumen contents) ( high in damara sheep compared to meatmaster sheep in ovis aries irene feed supplement diet farm gauteng province rumen republic of south africa )2025-12-29v31 / 1411pendingNo

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