Experiment ID: 2103

Field Description
nameimmunoglobulin recognition of fecal bacteria in stunted and non-stunted children: findings from the afribiota study (7385872) - gpt-5
proj_id7385872
sraprjna603512
date_of_upload29/12/2025 01:33
doi10.1186/s40168-020-00890-1
modelgpt-5
sample_groups_version15
dbbact_id804
dbbact_linkhttps://dbbact.org/exp_info/804
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
antananarivo0.666667
bangui0.666667
central african republic0.500000
madagascar0.400000
child stage0.285714
2-5 year-old child stage0.181818
iga negative fraction0.181818
iga positive fraction0.181818
LOWER IN iga negative fraction0.133333
LOWER IN iga positive fraction0.133333
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
antananarivo0.500000
bangui0.500000
central african republic0.333333
madagascar0.250000
child stage0.166667
iga negative fraction0.111111
iga positive fraction0.111111
LOWER IN iga negative fraction0.111111
LOWER IN iga positive fraction0.111111
2-5 year-old child stage0.100000
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
child stage1.000000
feces1.000000
homo sapiens1.000000
house1.000000
antananarivo1.000000
2-5 year-old child stage1.000000
central african republic1.000000
environmental enteric dysfunction1.000000
madagascar1.000000
bangui1.000000
iga negative fraction0.500000
iga positive fraction0.500000
LOWER IN iga negative fraction0.166667
LOWER IN iga positive fraction0.166667
Number of experiments associating the term to the sequence
TermScore
child stage1.000000
feces1.000000
homo sapiens1.000000
house1.000000
antananarivo1.000000
2-5 year-old child stage1.000000
central african republic1.000000
environmental enteric dysfunction1.000000
madagascar1.000000
bangui1.000000
iga negative fraction1.000000
iga positive fraction1.000000
LOWER IN iga negative fraction1.000000
LOWER IN iga positive fraction1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2103gpt-5Stunted children – IgA-negative fecal fraction + Non-stunted children – IgA-negative fecal fraction (dominant child stage, feces, homo sapiens, house, antananarivo, 2-5 year-old child stage, central african republic, environmental enteric dysfunction, madagascar, bangui, iga negative fraction)2025-12-29v41 / 15pendingNo
2103gpt-5IgA-coated (immune-targeted) vs IgA-negative bacteria among stunted children ( high in iga negative fraction compared to iga positive fraction in child stage feces homo sapiens house antananarivo 2-5 year-old child stage environmental enteric dysfunction central african republic madagascar bangui )2025-12-29v41 / 15pendingNo
2103gpt-5Non-stunted children – IgA-positive fecal fraction + Stunted children – IgA-positive fecal fraction (dominant child stage, feces, homo sapiens, iga positive fraction, house, antananarivo, 2-5 year-old child stage, central african republic, environmental enteric dysfunction, madagascar, bangui)2025-12-29v41 / 17pendingNo
2103gpt-5IgA-coated (immune-targeted) vs IgA-negative bacteria among stunted children ( high in iga positive fraction compared to iga negative fraction in child stage feces homo sapiens house antananarivo 2-5 year-old child stage environmental enteric dysfunction central african republic madagascar bangui )2025-12-29v41 / 34pendingNo
2103gpt-5Non-stunted children – IgA-positive fecal fraction + Stunted children – IgA-positive fecal fraction (common child stage, feces, homo sapiens, iga positive fraction, house, antananarivo, 2-5 year-old child stage, central african republic, environmental enteric dysfunction, madagascar, bangui)2025-12-29v41 / 49pendingNo
2103gpt-5Stunted children – IgA-negative fecal fraction + Non-stunted children – IgA-negative fecal fraction (common child stage, feces, homo sapiens, house, antananarivo, 2-5 year-old child stage, central african republic, environmental enteric dysfunction, madagascar, bangui, iga negative fraction)2025-12-29v41 / 50pendingNo

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