Experiment ID: 2075

Field Description
namerecent urbanization in china is correlated with a westernized microbiome encoding increased virulence and antibiotic resistance genes (5603068) - gpt-5
proj_id5603068
sraprjna349463
date_of_upload28/12/2025 12:57
doi10.1186/s40168-017-0338-7
modelgpt-5
dbbact_id290
dbbact_linkhttps://dbbact.org/exp_info/290
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
LOWER IN urban biome0.285714
urban biome0.222222
hunan province0.142857
LOWER IN rural community0.095238
rural community0.057143
human adult stage0.023256
china0.004717
LOWER IN control0.004494
control0.004435
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN urban biome1.000000
urban biome0.142857
hunan province0.076923
LOWER IN rural community0.066667
rural community0.030303
human adult stage0.011765
china0.002364
LOWER IN control0.002278
control0.002227
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
human house1.000000
human adult stage1.000000
homo sapiens1.000000
hunan province1.000000
china1.000000
feces1.000000
control0.500000
rural living0.500000
rural community0.500000
urbanization0.500000
urban biome0.500000
LOWER IN urbanization0.166667
LOWER IN urban biome0.166667
LOWER IN rural community0.166667
LOWER IN rural living0.166667
LOWER IN control0.166667
Number of experiments associating the term to the sequence
TermScore
control1.000000
human house1.000000
rural living1.000000
human adult stage1.000000
homo sapiens1.000000
hunan province1.000000
china1.000000
feces1.000000
rural community1.000000
urbanization1.000000
urban biome1.000000
LOWER IN urbanization1.000000
LOWER IN urban biome1.000000
LOWER IN rural community1.000000
LOWER IN rural living1.000000
LOWER IN control1.000000

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