Experiment ID: 2067

Field Description
nameparkinson’s disease and pd medications have distinct signatures of the gut microbiome (5469442) - gpt-5
proj_id5469442
sraerp016332
date_of_upload28/12/2025 04:47
doi10.1002/mds.26942
modelgpt-5
dbbact_id591
dbbact_linkhttps://dbbact.org/exp_info/591
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
seattle0.666667
parkinson's disease0.300000
LOWER IN parkinson's disease0.222222
human adult stage0.045455
LOWER IN control0.008889
control0.008791
united states of america0.006645
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
seattle0.500000
LOWER IN parkinson's disease0.250000
parkinson's disease0.200000
human adult stage0.023256
LOWER IN control0.004545
control0.004444
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
human adult stage1.000000
homo sapiens1.000000
city of atlanta1.000000
city of albany1.000000
united states of america1.000000
home1.000000
feces1.000000
seattle1.000000
parkinson's disease0.600000
control0.400000
anticholinergic use0.200000
trihexyphenidyl0.200000
benztropine0.200000
LOWER IN parkinson's disease0.200000
LOWER IN control0.200000
Number of experiments associating the term to the sequence
TermScore
anticholinergic use1.000000
human adult stage1.000000
homo sapiens1.000000
city of atlanta1.000000
city of albany1.000000
united states of america1.000000
home1.000000
trihexyphenidyl1.000000
benztropine1.000000
parkinson's disease1.000000
feces1.000000
seattle1.000000
control1.000000
LOWER IN parkinson's disease1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2067gpt-5Control human stool samples (dominant human adult stage, homo sapiens, city of atlanta, city of albany, united states of america, home, control, feces, seattle)2025-12-28v41 / 17pendingNo
2067gpt-5PD stool samples on anticholinergic (dominant anticholinergic use, human adult stage, homo sapiens, city of atlanta, city of albany, united states of america, home, trihexyphenidyl, benztropine, parkinson's disease, feces, seattle)2025-12-28v41 / 20pendingNo
2067gpt-5PD on COMT inhibitor vs healthy controls ( high in parkinson's disease compared to control in human adult stage homo sapiens city of atlanta city of albany united states of america home feces seattle )2025-12-28v41 / 20pendingNo
2067gpt-5PD stool samples without COMT inhibitor + PD stool samples on COMT inhibitor (dominant human adult stage, homo sapiens, city of atlanta, city of albany, united states of america, home, parkinson's disease, feces, seattle)2025-12-28v41 / 21pendingNo
2067gpt-5Parkinson's disease vs controls (stool microbiome) ( high in parkinson's disease compared to control in human adult stage homo sapiens city of atlanta city of albany united states of america home feces seattle )2025-12-28v41 / 22pendingNo
2067gpt-5Parkinson's disease vs controls (stool microbiome) ( high in control compared to parkinson's disease in human adult stage homo sapiens city of atlanta city of albany united states of america home feces seattle )2025-12-28v41 / 27pendingNo
2067gpt-5PD on COMT inhibitor vs healthy controls ( high in control compared to parkinson's disease in human adult stage homo sapiens city of atlanta city of albany united states of america home feces seattle )2025-12-28v41 / 27pendingNo
2067gpt-5PD stool samples without COMT inhibitor + PD stool samples on COMT inhibitor (common human adult stage, homo sapiens, city of atlanta, city of albany, united states of america, home, parkinson's disease, feces, seattle)2025-12-28v41 / 44pendingNo
2067gpt-5Control human stool samples (common human adult stage, homo sapiens, city of atlanta, city of albany, united states of america, home, control, feces, seattle)2025-12-28v41 / 56pendingNo
2067gpt-5PD stool samples on anticholinergic (common anticholinergic use, human adult stage, homo sapiens, city of atlanta, city of albany, united states of america, home, trihexyphenidyl, benztropine, parkinson's disease, feces, seattle)2025-12-28v41 / 107pendingNo

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