Experiment ID: 2064

Field Description
namedifferences in gut metabolites and microbial composition and functions between egyptian and u.s. children are consistent with their diets (5296411) - gpt-5
proj_id5296411
sraprjna314988
date_of_upload28/12/2025 04:44
doi10.1128/msystems.00169-16
modelgpt-5
dbbact_id62
dbbact_linkhttps://dbbact.org/exp_info/62
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
urban biome0.400000
western diet0.333333
egypt0.250000
LOWER IN egypt0.250000
LOWER IN western diet0.200000
adolescent stage0.142857
male organism0.111111
LOWER IN united states of america0.111111
united states of america0.006623
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN egypt0.500000
urban biome0.250000
western diet0.250000
LOWER IN western diet0.250000
egypt0.166667
LOWER IN united states of america0.083333
adolescent stage0.076923
male organism0.058824
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
urban biome1.000000
homo sapiens1.000000
feces1.000000
adolescent stage1.000000
male organism1.000000
mediterranean diet0.500000
giza governorate0.500000
egypt0.500000
city of dayton0.500000
united states of america0.500000
western diet0.500000
LOWER IN city of dayton0.166667
LOWER IN united states of america0.166667
LOWER IN western diet0.166667
LOWER IN mediterranean diet0.166667
LOWER IN giza governorate0.166667
LOWER IN egypt0.166667
Number of experiments associating the term to the sequence
TermScore
urban biome1.000000
homo sapiens1.000000
feces1.000000
mediterranean diet1.000000
giza governorate1.000000
adolescent stage1.000000
male organism1.000000
egypt1.000000
city of dayton1.000000
united states of america1.000000
western diet1.000000
LOWER IN city of dayton1.000000
LOWER IN united states of america1.000000
LOWER IN western diet1.000000
LOWER IN mediterranean diet1.000000
LOWER IN giza governorate1.000000
LOWER IN egypt1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2064gpt-5Egyptian children fecal samples (16S amplicon) (dominant urban biome, homo sapiens, feces, mediterranean diet, giza governorate, adolescent stage, male organism, egypt)2025-12-28v41 / 19pendingNo
2064gpt-5U.S. children fecal samples (16S amplicon) (dominant urban biome, homo sapiens, feces, city of dayton, united states of america, adolescent stage, western diet, male organism)2025-12-28v41 / 26pendingNo
2064gpt-5Geography-associated differences in gut microbiome of children (Egypt vs USA, 16S fecal) ( high in city of dayton united states of america western diet compared to mediterranean diet giza governorate egypt in urban biome homo sapiens feces adolescent stage male organism )2025-12-28v41 / 107pendingNo
2064gpt-5Geography-associated differences in gut microbiome of children (Egypt vs USA, 16S fecal) ( high in mediterranean diet giza governorate egypt compared to city of dayton united states of america western diet in urban biome homo sapiens feces adolescent stage male organism )2025-12-28v41 / 148pendingNo
2064gpt-5U.S. children fecal samples (16S amplicon) (common urban biome, homo sapiens, feces, city of dayton, united states of america, adolescent stage, western diet, male organism)2025-12-28v41 / 295pendingNo
2064gpt-5Egyptian children fecal samples (16S amplicon) (common urban biome, homo sapiens, feces, mediterranean diet, giza governorate, adolescent stage, male organism, egypt)2025-12-28v41 / 316pendingNo

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