Experiment ID: 2043

Field Description
nameindoor-air microbiome in an urban subway network: diversity and dynamics (4249038) - gpt-5
proj_id4249038
sraprjna230428
date_of_upload28/12/2025 02:57
doi10.1128/aem.02244-14
modelgpt-5
dbbact_id475
dbbact_linkhttps://dbbact.org/exp_info/475
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
subway0.687500
outdoor0.583333
urban biome0.407407
hong kong0.400000
indoor0.375000
LOWER IN urban biome0.181818
LOWER IN subway0.181818
LOWER IN indoor0.166667
LOWER IN outdoor0.166667
china0.009390
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN urban biome1.000000
LOWER IN subway1.000000
outdoor0.500000
LOWER IN indoor0.500000
subway0.500000
indoor0.500000
LOWER IN outdoor0.500000
urban biome0.250000
hong kong0.250000
china0.004717
Fraction of annotations for the query sequences containing the term
TermScore
urban biome1.100000
subway1.100000
train carriage1.000000
station concourse1.000000
china1.000000
hong kong1.000000
special adminstrative region (china)1.000000
above ground0.800000
open platform0.800000
naturally ventilated0.800000
outdoor0.700000
screen doors present0.600000
train platform0.600000
mechanically ventilated0.600000
underground0.600000
indoor0.300000
road0.300000
LOWER IN screen doors present0.200000
LOWER IN train platform0.200000
LOWER IN mechanically ventilated0.200000
LOWER IN underground0.200000
LOWER IN above ground0.200000
LOWER IN open platform0.200000
LOWER IN naturally ventilated0.200000
LOWER IN indoor0.100000
LOWER IN outdoor0.100000
LOWER IN urban biome0.100000
LOWER IN road0.100000
LOWER IN subway0.100000
Number of experiments associating the term to the sequence
TermScore
outdoor1.000000
above ground1.000000
open platform1.000000
naturally ventilated1.000000
LOWER IN screen doors present1.000000
LOWER IN indoor1.000000
LOWER IN train platform1.000000
LOWER IN mechanically ventilated1.000000
LOWER IN underground1.000000
train carriage1.000000
urban biome1.000000
station concourse1.000000
china1.000000
hong kong1.000000
special adminstrative region (china)1.000000
subway1.000000
screen doors present1.000000
indoor1.000000
train platform1.000000
mechanically ventilated1.000000
underground1.000000
LOWER IN outdoor1.000000
LOWER IN above ground1.000000
LOWER IN open platform1.000000
LOWER IN naturally ventilated1.000000
road1.000000
LOWER IN urban biome1.000000
LOWER IN road1.000000
LOWER IN subway1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2043gpt-5Underground MTR (subway) air samples (dominant screen doors present, train carriage, urban biome, indoor, train platform, station concourse, special adminstrative region (china), hong kong, mechanically ventilated, underground, china, subway)2025-12-28v41 / 11pendingNo
2043gpt-5Outdoor urban air samples near MTR stations + Underground MTR (subway) air samples + Aboveground MTR (subway) air samples (dominant screen doors present, outdoor, above ground, train carriage, urban biome, train platform, station concourse, road, naturally ventilated, special adminstrative region (china), hong kong, open platform, mechanically ventilated, underground, china, subway)2025-12-28v41 / 12pendingNo
2043gpt-5Aboveground MTR (subway) air samples (dominant outdoor, above ground, train carriage, urban biome, station concourse, special adminstrative region (china), naturally ventilated, hong kong, open platform, china, subway)2025-12-28v41 / 14pendingNo
2043gpt-5Aboveground MTR vs nearby outdoor urban air ( high in screen doors present above ground urban biome train platform road naturally ventilated open platform mechanically ventilated underground subway compared to in outdoor above ground train carriage urban biome station concourse naturally ventilated special adminstrative region (china) hong kong open platform china subway )2025-12-28v41 / 80pendingNo
2043gpt-5Aboveground MTR vs nearby outdoor urban air ( high in compared to screen doors present above ground urban biome train platform road naturally ventilated open platform mechanically ventilated underground subway in outdoor above ground train carriage urban biome station concourse naturally ventilated special adminstrative region (china) hong kong open platform china subway )2025-12-28v41 / 98pendingNo
2043gpt-5Aboveground MTR (subway) air samples (common outdoor, above ground, train carriage, urban biome, station concourse, special adminstrative region (china), naturally ventilated, hong kong, open platform, china, subway)2025-12-28v41 / 138pendingNo
2043gpt-5Outdoor urban air samples near MTR stations + Underground MTR (subway) air samples + Aboveground MTR (subway) air samples (common screen doors present, outdoor, above ground, train carriage, urban biome, train platform, station concourse, road, naturally ventilated, special adminstrative region (china), hong kong, open platform, mechanically ventilated, underground, china, subway)2025-12-28v41 / 145pendingNo
2043gpt-5Underground vs aboveground MTR air microbiomes ( high in screen doors present indoor train platform mechanically ventilated underground compared to outdoor above ground open platform naturally ventilated in train carriage urban biome station concourse china hong kong special adminstrative region (china) subway )2025-12-28v41 / 154pendingNo
2043gpt-5Underground MTR (subway) air samples (common screen doors present, train carriage, urban biome, indoor, train platform, station concourse, special adminstrative region (china), hong kong, mechanically ventilated, underground, china, subway)2025-12-28v41 / 161pendingNo
2043gpt-5Underground vs aboveground MTR air microbiomes ( high in outdoor above ground open platform naturally ventilated compared to screen doors present indoor train platform mechanically ventilated underground in train carriage urban biome station concourse china hong kong special adminstrative region (china) subway )2025-12-28v41 / 164pendingNo

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