Experiment ID: 2021

Field Description
namesuccession of rumen microbiota and metabolites across different reproductive periods in different sheep breeds and their impact on the growth and development of offspring lambs (11397069) - gpt-5
proj_id11397069
sraprjna1060421
date_of_upload10/12/2025 18:38
doi10.1186/s40168-024-01892-z
modelgpt-5
dbbact_id1115
dbbact_linkhttps://dbbact.org/exp_info/1115
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
suffolk sheep0.555556
hu sheep0.428571
non-pregnant0.352941
LOWER IN hu sheep0.200000
LOWER IN suffolk sheep0.200000
LOWER IN non-pregnant0.181818
ovis aries0.111111
female organism0.100000
rumen0.071429
farm0.045455
china0.009390
Fraction of dbbact annotations with this term covered by the query
TermScore
suffolk sheep0.500000
hu sheep0.500000
LOWER IN hu sheep0.500000
LOWER IN suffolk sheep0.500000
non-pregnant0.333333
LOWER IN non-pregnant0.333333
ovis aries0.058824
female organism0.052632
rumen0.037037
farm0.023256
china0.004717
Fraction of annotations for the query sequences containing the term
TermScore
china1.000000
lanzhou city prefecture1.000000
rumen1.000000
ovis aries1.000000
female organism1.000000
farm1.000000
suffolk sheep0.625000
lactating0.416667
gravid organism0.416667
non-pregnant0.375000
hu sheep0.375000
LOWER IN gravid organism0.166667
LOWER IN lactating0.166667
LOWER IN hu sheep0.125000
LOWER IN suffolk sheep0.125000
LOWER IN non-pregnant0.125000
Number of experiments associating the term to the sequence
TermScore
china1.000000
lactating1.000000
lanzhou city prefecture1.000000
rumen1.000000
suffolk sheep1.000000
ovis aries1.000000
female organism1.000000
farm1.000000
non-pregnant1.000000
hu sheep1.000000
gravid organism1.000000
LOWER IN gravid organism1.000000
LOWER IN hu sheep1.000000
LOWER IN suffolk sheep1.000000
LOWER IN lactating1.000000
LOWER IN non-pregnant1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
2021gpt-5Hu sheep non-pregnancy rumen samples (dominant non-pregnant, hu sheep, china, lanzhou city prefecture, rumen, ovis aries, female organism, farm)2025-12-10v31 / 6pendingNo
2021gpt-5Suffolk lactation rumen samples (dominant china, lactating, lanzhou city prefecture, rumen, suffolk sheep, ovis aries, female organism, farm)2025-12-10v31 / 7pendingNo
2021gpt-5Hu sheep pregnancy rumen samples + Hu sheep lactation rumen samples (dominant ovis aries, hu sheep, china, lactating, lanzhou city prefecture, rumen, gravid organism, female organism, farm)2025-12-10v31 / 8pendingNo
2021gpt-5Suffolk pregnancy rumen samples (dominant ovis aries, china, lanzhou city prefecture, rumen, suffolk sheep, gravid organism, female organism, farm)2025-12-10v31 / 9pendingNo
2021gpt-5Suffolk non-pregnancy rumen samples (dominant non-pregnant, china, lanzhou city prefecture, rumen, suffolk sheep, ovis aries, female organism, farm)2025-12-10v31 / 11pendingNo
2021gpt-5Overall physiological stage effect (pregnancy vs lactation within breed: Suffolk) ( high in gravid organism compared to lactating in china lanzhou city prefecture rumen suffolk sheep ovis aries female organism farm )2025-12-10v31 / 11pendingNo
2021gpt-5Overall physiological stage effect (pregnancy vs lactation within breed: Suffolk) ( high in lactating compared to gravid organism in china lanzhou city prefecture rumen suffolk sheep ovis aries female organism farm )2025-12-10v31 / 18pendingNo
2021gpt-5Physiological stage effect in Suffolk sheep rumen (pregnancy vs non-pregnancy) ( high in gravid organism compared to non-pregnant in china lanzhou city prefecture rumen suffolk sheep ovis aries female organism farm )2025-12-10v31 / 26pendingNo
2021gpt-5Physiological stage effect in Suffolk sheep rumen (pregnancy vs non-pregnancy) ( high in non-pregnant compared to gravid organism in china lanzhou city prefecture rumen suffolk sheep ovis aries female organism farm )2025-12-10v31 / 39pendingNo
2021gpt-5Physiological stage effect in Suffolk sheep rumen (lactation vs non-pregnancy) ( high in non-pregnant compared to lactating in china lanzhou city prefecture rumen suffolk sheep ovis aries female organism farm )2025-12-10v31 / 48pendingNo
2021gpt-5Physiological stage effect in Hu sheep rumen (pregnancy vs non-pregnancy) ( high in lactating gravid organism compared to non-pregnant in hu sheep china lanzhou city prefecture rumen ovis aries female organism farm )2025-12-10v31 / 56pendingNo
2021gpt-5Physiological stage effect in Suffolk sheep rumen (lactation vs non-pregnancy) ( high in lactating compared to non-pregnant in china lanzhou city prefecture rumen suffolk sheep ovis aries female organism farm )2025-12-10v31 / 61pendingNo
2021gpt-5Baseline breed differences in rumen microbiome (non-pregnancy Hu vs Suffolk) ( high in suffolk sheep compared to hu sheep in non-pregnant china lanzhou city prefecture rumen ovis aries female organism farm )2025-12-10v31 / 111pendingNo
2021gpt-5Pregnancy effect on rumen microbiome by breed (Hu vs Suffolk) ( high in lactating hu sheep compared to suffolk sheep in china gravid organism lanzhou city prefecture rumen ovis aries female organism farm )2025-12-10v31 / 113pendingNo
2021gpt-5Physiological stage effect in Hu sheep rumen (pregnancy vs non-pregnancy) ( high in non-pregnant compared to lactating gravid organism in hu sheep china lanzhou city prefecture rumen ovis aries female organism farm )2025-12-10v31 / 179pendingNo
2021gpt-5Baseline breed differences in rumen microbiome (non-pregnancy Hu vs Suffolk) ( high in hu sheep compared to suffolk sheep in non-pregnant china lanzhou city prefecture rumen ovis aries female organism farm )2025-12-10v31 / 191pendingNo
2021gpt-5Pregnancy effect on rumen microbiome by breed (Hu vs Suffolk) ( high in suffolk sheep compared to lactating hu sheep in china gravid organism lanzhou city prefecture rumen ovis aries female organism farm )2025-12-10v31 / 197pendingNo
2021gpt-5Lactation effect on rumen microbiome by breed (Hu vs Suffolk) ( high in gravid organism hu sheep compared to suffolk sheep in china lactating lanzhou city prefecture rumen ovis aries female organism farm )2025-12-10v31 / 204pendingNo
2021gpt-5Lactation effect on rumen microbiome by breed (Hu vs Suffolk) ( high in suffolk sheep compared to gravid organism hu sheep in china lactating lanzhou city prefecture rumen ovis aries female organism farm )2025-12-10v31 / 446pendingNo
2021gpt-5Hu sheep pregnancy rumen samples + Hu sheep lactation rumen samples (common ovis aries, hu sheep, china, lactating, lanzhou city prefecture, rumen, gravid organism, female organism, farm)2025-12-10v31 / 860pendingNo
2021gpt-5Suffolk non-pregnancy rumen samples (common non-pregnant, china, lanzhou city prefecture, rumen, suffolk sheep, ovis aries, female organism, farm)2025-12-10v31 / 877pendingNo
2021gpt-5Suffolk pregnancy rumen samples (common ovis aries, china, lanzhou city prefecture, rumen, suffolk sheep, gravid organism, female organism, farm)2025-12-10v31 / 1004pendingNo
2021gpt-5Hu sheep non-pregnancy rumen samples (common non-pregnant, hu sheep, china, lanzhou city prefecture, rumen, ovis aries, female organism, farm)2025-12-10v31 / 1174pendingNo
2021gpt-5Suffolk lactation rumen samples (common china, lactating, lanzhou city prefecture, rumen, suffolk sheep, ovis aries, female organism, farm)2025-12-10v31 / 1288pendingNo

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