Experiment ID: 1998

Field Description
nameimpact of diabetes on the gut and salivary iga microbiomes (7671898) - gpt-5
proj_id7671898
sraprjna662100
date_of_upload10/12/2025 13:35
doi10.1128/iai.00301-20
modelgpt-5
dbbact_id841
dbbact_linkhttps://dbbact.org/exp_info/841
needs_manual_reviewtrue

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
type 2 diabetes mellitus0.166667
LOWER IN oral cavity0.166667
iga positive fraction0.111111
iga negative fraction0.111111
LOWER IN iga negative fraction0.111111
LOWER IN iga positive fraction0.111111
state of texas0.100000
oral cavity0.050000
LOWER IN saliva0.050000
LOWER IN feces0.033333
human adult stage0.023256
saliva0.014925
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
starr county1.000000
homo sapiens1.000000
state of texas1.000000
human adult stage1.000000
type 2 diabetes mellitus0.800000
normoglycemia0.800000
prediabetes syndrome0.600000
igm negative0.600000
iga positive fraction0.600000
iga negative fraction0.600000
oral cavity0.500000
saliva0.500000
feces0.500000
biome0.400000
presort0.400000
LOWER IN igm negative0.200000
LOWER IN feces0.100000
LOWER IN oral cavity0.100000
LOWER IN saliva0.100000
LOWER IN iga negative fraction0.100000
LOWER IN iga positive fraction0.100000
LOWER IN presort0.100000
LOWER IN biome0.100000
LOWER IN prediabetes syndrome0.100000
Number of experiments associating the term to the sequence
TermScore
oral cavity1.000000
saliva1.000000
LOWER IN feces1.000000
united states of america1.000000
prediabetes syndrome1.000000
type 2 diabetes mellitus1.000000
normoglycemia1.000000
starr county1.000000
homo sapiens1.000000
state of texas1.000000
biome1.000000
human adult stage1.000000
presort1.000000
feces1.000000
LOWER IN oral cavity1.000000
LOWER IN saliva1.000000
igm negative1.000000
LOWER IN igm negative1.000000
iga positive fraction1.000000
iga negative fraction1.000000
LOWER IN iga negative fraction1.000000
LOWER IN iga positive fraction1.000000
LOWER IN presort1.000000
LOWER IN biome1.000000
LOWER IN prediabetes syndrome1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1998gpt-5Oral presort vs IgA+ fraction (normoglycemic) — enrichment of immune-targeted taxa ( high in iga negative fraction igm negative iga positive fraction compared to presort biome prediabetes syndrome in oral cavity united states of america type 2 diabetes mellitus normoglycemia starr county homo sapiens saliva state of texas human adult stage )2025-12-10v41 / 4pendingNo
1998gpt-5Gut presort vs IgA+ fraction (normoglycemic) — enrichment of immune-targeted taxa ( high in iga negative fraction igm negative iga positive fraction compared to presort biome prediabetes syndrome in feces united states of america type 2 diabetes mellitus normoglycemia starr county homo sapiens state of texas human adult stage )2025-12-10v41 / 9pendingNo
1998gpt-5Diabetic saliva IgA- (IgM-) fraction + Diabetic saliva IgA+ (IgM-) fraction + Normoglycemic saliva IgA+ (IgM-) fraction + Normoglycemic saliva IgA- (IgM-) fraction (dominant oral cavity, iga positive fraction, united states of america, igm negative, type 2 diabetes mellitus, starr county, homo sapiens, normoglycemia, state of texas, iga negative fraction, human adult stage, saliva)2025-12-10v41 / 16pendingNo
1998gpt-5Prediabetic saliva presort (overall microbiome) + Normoglycemic saliva presort (overall microbiome) + Diabetic saliva presort (overall microbiome) (dominant oral cavity, united states of america, prediabetes syndrome, type 2 diabetes mellitus, starr county, homo sapiens, normoglycemia, state of texas, human adult stage, biome, saliva, presort)2025-12-10v41 / 18pendingNo
1998gpt-5Prediabetic saliva IgA- (IgM-) fraction + Prediabetic saliva IgA+ (IgM-) fraction (dominant oral cavity, iga positive fraction, united states of america, prediabetes syndrome, igm negative, starr county, homo sapiens, state of texas, iga negative fraction, human adult stage, saliva)2025-12-10v41 / 19pendingNo
1998gpt-5Prediabetic stool IgA- fraction + Prediabetic stool IgA+ fraction (dominant iga positive fraction, feces, united states of america, prediabetes syndrome, igm negative, starr county, homo sapiens, state of texas, iga negative fraction, human adult stage)2025-12-10v41 / 20pendingNo
1998gpt-5Diabetic stool IgA+ fraction + Diabetic stool IgA- fraction + Normoglycemic stool IgA+ fraction + Normoglycemic stool IgA- fraction (dominant iga positive fraction, feces, united states of america, igm negative, type 2 diabetes mellitus, starr county, homo sapiens, normoglycemia, state of texas, iga negative fraction, human adult stage)2025-12-10v41 / 22pendingNo
1998gpt-5Prediabetic stool presort (overall microbiome) + Normoglycemic stool presort (overall microbiome) + Diabetic stool presort (overall microbiome) (dominant feces, united states of america, prediabetes syndrome, type 2 diabetes mellitus, starr county, homo sapiens, normoglycemia, state of texas, biome, human adult stage, presort)2025-12-10v41 / 23pendingNo
1998gpt-5Diabetic stool IgA+ fraction + Diabetic stool IgA- fraction + Normoglycemic stool IgA+ fraction + Normoglycemic stool IgA- fraction (common iga positive fraction, feces, united states of america, igm negative, type 2 diabetes mellitus, starr county, homo sapiens, normoglycemia, state of texas, iga negative fraction, human adult stage)2025-12-10v41 / 51pendingNo
1998gpt-5Gut presort vs IgA+ fraction (normoglycemic) — enrichment of immune-targeted taxa ( high in presort biome prediabetes syndrome compared to iga negative fraction igm negative iga positive fraction in feces united states of america type 2 diabetes mellitus normoglycemia starr county homo sapiens state of texas human adult stage )2025-12-10v41 / 54pendingNo
1998gpt-5Prediabetic stool IgA- fraction + Prediabetic stool IgA+ fraction (common iga positive fraction, feces, united states of america, prediabetes syndrome, igm negative, starr county, homo sapiens, state of texas, iga negative fraction, human adult stage)2025-12-10v41 / 55pendingNo
1998gpt-5Prediabetic saliva IgA- (IgM-) fraction + Prediabetic saliva IgA+ (IgM-) fraction (common oral cavity, iga positive fraction, united states of america, prediabetes syndrome, igm negative, starr county, homo sapiens, state of texas, iga negative fraction, human adult stage, saliva)2025-12-10v41 / 61pendingNo
1998gpt-5Diabetic saliva IgA- (IgM-) fraction + Diabetic saliva IgA+ (IgM-) fraction + Normoglycemic saliva IgA+ (IgM-) fraction + Normoglycemic saliva IgA- (IgM-) fraction (common oral cavity, iga positive fraction, united states of america, igm negative, type 2 diabetes mellitus, starr county, homo sapiens, normoglycemia, state of texas, iga negative fraction, human adult stage, saliva)2025-12-10v41 / 73pendingNo
1998gpt-5Prediabetic stool presort (overall microbiome) + Normoglycemic stool presort (overall microbiome) + Diabetic stool presort (overall microbiome) (common feces, united states of america, prediabetes syndrome, type 2 diabetes mellitus, starr county, homo sapiens, normoglycemia, state of texas, biome, human adult stage, presort)2025-12-10v41 / 86pendingNo
1998gpt-5Prediabetic saliva presort (overall microbiome) + Normoglycemic saliva presort (overall microbiome) + Diabetic saliva presort (overall microbiome) (common oral cavity, united states of america, prediabetes syndrome, type 2 diabetes mellitus, starr county, homo sapiens, normoglycemia, state of texas, human adult stage, biome, saliva, presort)2025-12-10v41 / 130pendingNo
1998gpt-5Oral presort vs IgA+ fraction (normoglycemic) — enrichment of immune-targeted taxa ( high in presort biome prediabetes syndrome compared to iga negative fraction igm negative iga positive fraction in oral cavity united states of america type 2 diabetes mellitus normoglycemia starr county homo sapiens saliva state of texas human adult stage )2025-12-10v41 / 144pendingNo
1998gpt-5Site-specific differences in IgA-targeted taxa (normoglycemic): Stool IgA+ vs Saliva IgA+ ( high in igm negative feces compared to igm negative oral cavity saliva in iga positive fraction united states of america type 2 diabetes mellitus normoglycemia starr county homo sapiens state of texas iga negative fraction human adult stage )2025-12-10v41 / 195pendingNo
1998gpt-5Site-specific differences in IgA-targeted taxa (normoglycemic): Stool IgA+ vs Saliva IgA+ ( high in igm negative oral cavity saliva compared to igm negative feces in iga positive fraction united states of america type 2 diabetes mellitus normoglycemia starr county homo sapiens state of texas iga negative fraction human adult stage )2025-12-10v41 / 212pendingNo
1998gpt-5Site-specific differences in presort microbiome (normoglycemic): Stool vs Saliva ( high in feces compared to oral cavity saliva in united states of america prediabetes syndrome type 2 diabetes mellitus normoglycemia starr county homo sapiens state of texas biome human adult stage presort )2025-12-10v41 / 260pendingNo
1998gpt-5Site-specific differences in presort microbiome (normoglycemic): Stool vs Saliva ( high in oral cavity saliva compared to feces in united states of america prediabetes syndrome type 2 diabetes mellitus normoglycemia starr county homo sapiens state of texas biome human adult stage presort )2025-12-10v41 / 357pendingNo

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