Experiment ID: 1994

Field Description
nameimmunoglobulin recognition of fecal bacteria in stunted and non-stunted children: findings from the afribiota study (7385872) - gpt-5
proj_id7385872
sraprjna603512
date_of_upload10/12/2025 13:27
doi10.1186/s40168-020-00890-1
modelgpt-5
dbbact_id804
dbbact_linkhttps://dbbact.org/exp_info/804
needs_manual_reviewtrue

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
bangui0.500000
LOWER IN madagascar0.500000
LOWER IN central african republic0.500000
LOWER IN bangui0.500000
central african republic0.333333
5-year-old human stage0.333333
madagascar0.250000
3-year-old human stage0.200000
child stage0.166667
4-year-old human stage0.166667
iga positive fraction0.111111
2-5 year-old child stage0.100000
2-year-old human stage0.100000
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
3-year-old human stage1.000000
child stage1.000000
feces1.000000
stunting1.000000
2-5 year-old child stage1.000000
iga positive fraction1.000000
5-year-old human stage1.000000
4-year-old human stage1.000000
afribiota study1.000000
2-year-old human stage1.000000
control1.000000
homo sapiens1.000000
central african republic0.500000
bangui0.500000
madagascar0.500000
antananarivo-renivohitra district0.500000
LOWER IN madagascar0.166667
LOWER IN antananarivo-renivohitra district0.166667
LOWER IN central african republic0.166667
LOWER IN bangui0.166667
Number of experiments associating the term to the sequence
TermScore
central african republic1.000000
bangui1.000000
LOWER IN madagascar1.000000
LOWER IN antananarivo-renivohitra district1.000000
3-year-old human stage1.000000
child stage1.000000
feces1.000000
stunting1.000000
2-5 year-old child stage1.000000
iga positive fraction1.000000
5-year-old human stage1.000000
4-year-old human stage1.000000
afribiota study1.000000
2-year-old human stage1.000000
control1.000000
homo sapiens1.000000
madagascar1.000000
antananarivo-renivohitra district1.000000
LOWER IN central african republic1.000000
LOWER IN bangui1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1994gpt-5Non-stunted children (Central African Republic) IgA-positive fecal fraction + Stunted children (Central African Republic) IgA-positive fecal fraction (dominant 3-year-old human stage, child stage, feces, stunting, 2-5 year-old child stage, iga positive fraction, 5-year-old human stage, 4-year-old human stage, afribiota study, 2-year-old human stage, central african republic, bangui, control, homo sapiens)2025-12-10v41 / 19pendingNo
1994gpt-5Stunted children (Madagascar) IgA-positive fecal fraction + Non-stunted children (Madagascar) IgA-positive fecal fraction (dominant 3-year-old human stage, madagascar, child stage, feces, stunting, 2-5 year-old child stage, iga positive fraction, 5-year-old human stage, antananarivo-renivohitra district, 4-year-old human stage, afribiota study, 2-year-old human stage, control, homo sapiens)2025-12-10v41 / 25pendingNo
1994gpt-5Stunted children (Madagascar) IgA-positive fecal fraction + Non-stunted children (Madagascar) IgA-positive fecal fraction (common 3-year-old human stage, madagascar, child stage, feces, stunting, 2-5 year-old child stage, iga positive fraction, 5-year-old human stage, antananarivo-renivohitra district, 4-year-old human stage, afribiota study, 2-year-old human stage, control, homo sapiens)2025-12-10v41 / 52pendingNo
1994gpt-5Non-stunted children (Central African Republic) IgA-positive fecal fraction + Stunted children (Central African Republic) IgA-positive fecal fraction (common 3-year-old human stage, child stage, feces, stunting, 2-5 year-old child stage, iga positive fraction, 5-year-old human stage, 4-year-old human stage, afribiota study, 2-year-old human stage, central african republic, bangui, control, homo sapiens)2025-12-10v41 / 54pendingNo
1994gpt-5Geographic effects on IgA-targeted microbiome among stunted children ( high in madagascar antananarivo-renivohitra district compared to central african republic bangui in 3-year-old human stage child stage feces stunting 2-5 year-old child stage iga positive fraction 5-year-old human stage 4-year-old human stage afribiota study 2-year-old human stage control homo sapiens )2025-12-10v41 / 96pendingNo
1994gpt-5Geographic effects on IgA-targeted microbiome among stunted children ( high in central african republic bangui compared to madagascar antananarivo-renivohitra district in 3-year-old human stage child stage feces stunting 2-5 year-old child stage iga positive fraction 5-year-old human stage 4-year-old human stage afribiota study 2-year-old human stage control homo sapiens )2025-12-10v41 / 156pendingNo

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