Experiment ID: 1987

Field Description
nameresponse of beef cattle fecal microbiota to grazing on toxic tall fescue (6643230) - gpt-5
proj_id6643230
sraprjna540841
date_of_upload10/12/2025 04:37
doi10.1128/aem.00032-19
modelgpt-5
dbbact_id518
dbbact_linkhttps://dbbact.org/exp_info/518
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
pasture0.444444
LOWER IN pasture0.250000
LOWER IN farm0.200000
male organism0.111111
bos taurus0.100000
farm0.043478
LOWER IN control0.008850
control0.008830
united states of america0.006645
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN pasture0.500000
pasture0.333333
LOWER IN farm0.250000
male organism0.058824
bos taurus0.052632
farm0.023256
LOWER IN control0.004545
control0.004444
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
town of watkinsville1.000000
bos taurus1.000000
male organism1.000000
feces1.000000
united states of america1.000000
toxic tall fescue grazing0.666667
pasture0.666667
nontoxic tall fescue grazing0.666667
max-q cultivar0.666667
control0.666667
ergot alkaloids0.666667
fescue toxicosis0.666667
day 140.333333
post-placement0.333333
baseline0.333333
pre-placement0.333333
farm0.333333
LOWER IN baseline0.166667
LOWER IN pre-placement0.166667
LOWER IN farm0.166667
LOWER IN day 140.166667
LOWER IN toxic tall fescue grazing0.166667
LOWER IN pasture0.166667
LOWER IN nontoxic tall fescue grazing0.166667
LOWER IN max-q cultivar0.166667
LOWER IN control0.166667
LOWER IN ergot alkaloids0.166667
LOWER IN fescue toxicosis0.166667
LOWER IN post-placement0.166667
Number of experiments associating the term to the sequence
TermScore
day 141.000000
toxic tall fescue grazing1.000000
pasture1.000000
nontoxic tall fescue grazing1.000000
town of watkinsville1.000000
bos taurus1.000000
male organism1.000000
max-q cultivar1.000000
feces1.000000
united states of america1.000000
control1.000000
ergot alkaloids1.000000
fescue toxicosis1.000000
post-placement1.000000
baseline1.000000
pre-placement1.000000
farm1.000000
LOWER IN baseline1.000000
LOWER IN pre-placement1.000000
LOWER IN farm1.000000
LOWER IN day 141.000000
LOWER IN toxic tall fescue grazing1.000000
LOWER IN pasture1.000000
LOWER IN nontoxic tall fescue grazing1.000000
LOWER IN max-q cultivar1.000000
LOWER IN control1.000000
LOWER IN ergot alkaloids1.000000
LOWER IN fescue toxicosis1.000000
LOWER IN post-placement1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1987gpt-5Nontoxic Max-Q grazing steer fecal samples (post-placement) + Toxic endophyte (E+) grazing steer fecal samples (post-placement) (dominant toxic tall fescue grazing, pasture, nontoxic tall fescue grazing, town of watkinsville, bos taurus, male organism, max-q cultivar, feces, post-placement, united states of america, control, ergot alkaloids, fescue toxicosis)2025-12-10v41 / 10pendingNo
1987gpt-5Baseline (Pre) steer fecal samples before pasture assignment (dominant baseline, pre-placement, farm, town of watkinsville, bos taurus, male organism, feces, united states of america)2025-12-10v41 / 11pendingNo
1987gpt-5Day 14 toxic endophyte (E+) grazing steer fecal samples + Day 14 nontoxic Max-Q grazing steer fecal samples (dominant day 14, toxic tall fescue grazing, pasture, nontoxic tall fescue grazing, town of watkinsville, bos taurus, male organism, max-q cultivar, feces, united states of america, control, ergot alkaloids, fescue toxicosis)2025-12-10v41 / 11pendingNo
1987gpt-5Treatment effect at Day 14: E+ Day14 vs E+ all post-placement timepoints ( high in post-placement compared to day 14 in toxic tall fescue grazing pasture nontoxic tall fescue grazing town of watkinsville bos taurus male organism max-q cultivar feces united states of america control ergot alkaloids fescue toxicosis )2025-12-10v41 / 13pendingNo
1987gpt-5Treatment effect at Day 14: E+ Day14 vs E+ all post-placement timepoints ( high in day 14 compared to post-placement in toxic tall fescue grazing pasture nontoxic tall fescue grazing town of watkinsville bos taurus male organism max-q cultivar feces united states of america control ergot alkaloids fescue toxicosis )2025-12-10v41 / 21pendingNo
1987gpt-5Post-placement (E+ and Max-Q) vs baseline pre-assignment steers ( high in toxic tall fescue grazing pasture nontoxic tall fescue grazing post-placement max-q cultivar control ergot alkaloids fescue toxicosis compared to baseline pre-placement farm in town of watkinsville bos taurus male organism feces united states of america )2025-12-10v41 / 86pendingNo
1987gpt-5Post-placement (E+ and Max-Q) vs baseline pre-assignment steers ( high in baseline pre-placement farm compared to toxic tall fescue grazing pasture nontoxic tall fescue grazing post-placement max-q cultivar control ergot alkaloids fescue toxicosis in town of watkinsville bos taurus male organism feces united states of america )2025-12-10v41 / 152pendingNo
1987gpt-5Day 14 post-placement steers (E+ and Max-Q combined) vs baseline pre-assignment ( high in baseline pre-placement farm compared to day 14 toxic tall fescue grazing pasture nontoxic tall fescue grazing max-q cultivar control ergot alkaloids fescue toxicosis in town of watkinsville bos taurus male organism feces united states of america )2025-12-10v41 / 186pendingNo
1987gpt-5Day 14 post-placement steers (E+ and Max-Q combined) vs baseline pre-assignment ( high in day 14 toxic tall fescue grazing pasture nontoxic tall fescue grazing max-q cultivar control ergot alkaloids fescue toxicosis compared to baseline pre-placement farm in town of watkinsville bos taurus male organism feces united states of america )2025-12-10v41 / 263pendingNo
1987gpt-5Baseline (Pre) steer fecal samples before pasture assignment (common baseline, pre-placement, farm, town of watkinsville, bos taurus, male organism, feces, united states of america)2025-12-10v41 / 467pendingNo
1987gpt-5Nontoxic Max-Q grazing steer fecal samples (post-placement) + Toxic endophyte (E+) grazing steer fecal samples (post-placement) (common toxic tall fescue grazing, pasture, nontoxic tall fescue grazing, town of watkinsville, bos taurus, male organism, max-q cultivar, feces, post-placement, united states of america, control, ergot alkaloids, fescue toxicosis)2025-12-10v41 / 560pendingNo
1987gpt-5Day 14 toxic endophyte (E+) grazing steer fecal samples + Day 14 nontoxic Max-Q grazing steer fecal samples (common day 14, toxic tall fescue grazing, pasture, nontoxic tall fescue grazing, town of watkinsville, bos taurus, male organism, max-q cultivar, feces, united states of america, control, ergot alkaloids, fescue toxicosis)2025-12-10v41 / 738pendingNo

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