Experiment ID: 1973

Field Description
namenew york city house mice (mus musculus) as potential reservoirs for pathogenic bacteria and antimicrobial resistance determinants (5904414) - gpt-5
proj_id5904414
srasrp136544
date_of_upload10/12/2025 04:11
doi10.1128/mbio.00624-18
modelgpt-5
dbbact_id337
dbbact_linkhttps://dbbact.org/exp_info/337
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
urban biome0.400000
new york city0.250000
mus musculus0.027027
united states of america0.006645
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
urban biome0.250000
new york city0.142857
mus musculus0.013699
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
residential building1.000000
mus musculus1.000000
site1.000000
subbasement1.000000
feces1.000000
urban biome1.000000
new york city1.000000
room1.000000
united states of america1.000000
borough of manhattan0.666667
commercial building0.444444
chelsea0.444444
dyker heights0.444444
indoor kitchen0.444444
feed storage space0.444444
brooklyn0.444444
upper west side0.333333
queens county0.277778
fresh meadows0.277778
city of laconia0.277778
borough of the bronx0.277778
LOWER IN upper west side0.222222
LOWER IN queens county0.166667
LOWER IN fresh meadows0.166667
LOWER IN borough of the bronx0.166667
LOWER IN city of laconia0.166667
LOWER IN commercial building0.111111
LOWER IN chelsea0.111111
LOWER IN dyker heights0.111111
LOWER IN indoor kitchen0.111111
LOWER IN feed storage space0.111111
LOWER IN borough of manhattan0.111111
LOWER IN brooklyn0.111111
Exp. ID User ID Description Date Region Sequences Status Flag
1973gpt-5Bronx vs Manhattan: Laconia (X1) vs Upper West Side (M2) house mouse gut microbiota ( high in borough of manhattan upper west side compared to borough of the bronx city of laconia in residential building mus musculus site subbasement feces urban biome new york city room united states of america )2025-12-10v41 / 6pendingNo
1973gpt-5Outer-borough mice vs Manhattan mice ( high in queens county borough of the bronx fresh meadows city of laconia compared to upper west side in residential building mus musculus site commercial building chelsea dyker heights subbasement indoor kitchen feed storage space feces urban biome new york city borough of manhattan brooklyn room united states of america )2025-12-10v41 / 7pendingNo
1973gpt-5Bronx vs Manhattan: Laconia (X1) vs Upper West Side (M2) house mouse gut microbiota ( high in borough of the bronx city of laconia compared to borough of manhattan upper west side in residential building mus musculus site subbasement feces urban biome new york city room united states of america )2025-12-10v41 / 9pendingNo
1973gpt-5High-sample neighborhoods vs low-sample neighborhoods (stability across sampling depth) ( high in queens county fresh meadows compared to upper west side borough of the bronx city of laconia in residential building mus musculus site commercial building chelsea dyker heights subbasement indoor kitchen feed storage space feces urban biome new york city borough of manhattan brooklyn room united states of america )2025-12-10v41 / 12pendingNo
1973gpt-5Manhattan neighborhoods: Chelsea (M3) vs Upper West Side (M2) house mouse gut microbiota ( high in commercial building chelsea dyker heights indoor kitchen feed storage space brooklyn compared to upper west side in residential building mus musculus site subbasement feces urban biome new york city borough of manhattan room united states of america )2025-12-10v41 / 15pendingNo
1973gpt-5Fresh Meadows (Q1) house mouse fecal samples (16S) (dominant mus musculus, site, queens county, subbasement, feces, united states of america, urban biome, new york city, fresh meadows, room, residential building)2025-12-10v41 / 16pendingNo
1973gpt-5Upper West Side (M2) house mouse fecal samples (16S) (dominant upper west side, mus musculus, site, subbasement, feces, united states of america, urban biome, new york city, borough of manhattan, room, residential building)2025-12-10v41 / 16pendingNo
1973gpt-5Chelsea (M3) house mouse fecal samples (16S) + Dyker Heights (K1) house mouse fecal samples (16S) (dominant residential building, mus musculus, site, commercial building, chelsea, dyker heights, subbasement, indoor kitchen, feed storage space, feces, urban biome, new york city, borough of manhattan, brooklyn, room, united states of america)2025-12-10v41 / 18pendingNo
1973gpt-5Laconia (X1) house mouse fecal samples (16S) (dominant mus musculus, site, subbasement, feces, city of laconia, united states of america, borough of the bronx, urban biome, new york city, room, residential building)2025-12-10v41 / 22pendingNo
1973gpt-5Outer-borough mice vs Manhattan mice ( high in upper west side compared to queens county borough of the bronx fresh meadows city of laconia in residential building mus musculus site commercial building chelsea dyker heights subbasement indoor kitchen feed storage space feces urban biome new york city borough of manhattan brooklyn room united states of america )2025-12-10v41 / 50pendingNo
1973gpt-5High-sample neighborhoods vs low-sample neighborhoods (stability across sampling depth) ( high in upper west side borough of the bronx city of laconia compared to queens county fresh meadows in residential building mus musculus site commercial building chelsea dyker heights subbasement indoor kitchen feed storage space feces urban biome new york city borough of manhattan brooklyn room united states of america )2025-12-10v41 / 58pendingNo
1973gpt-5Manhattan neighborhoods: Chelsea (M3) vs Upper West Side (M2) house mouse gut microbiota ( high in upper west side compared to commercial building chelsea dyker heights indoor kitchen feed storage space brooklyn in residential building mus musculus site subbasement feces urban biome new york city borough of manhattan room united states of america )2025-12-10v41 / 79pendingNo
1973gpt-5Inter-neighborhood variation: Chelsea (M3) vs Fresh Meadows (Q1) house mouse gut microbiota ( high in commercial building chelsea dyker heights indoor kitchen feed storage space borough of manhattan brooklyn compared to queens county fresh meadows in residential building mus musculus site subbasement feces urban biome new york city room united states of america )2025-12-10v41 / 169pendingNo
1973gpt-5Chelsea (M3) house mouse fecal samples (16S) + Dyker Heights (K1) house mouse fecal samples (16S) (common residential building, mus musculus, site, commercial building, chelsea, dyker heights, subbasement, indoor kitchen, feed storage space, feces, urban biome, new york city, borough of manhattan, brooklyn, room, united states of america)2025-12-10v41 / 170pendingNo
1973gpt-5Upper West Side (M2) house mouse fecal samples (16S) (common upper west side, mus musculus, site, subbasement, feces, united states of america, urban biome, new york city, borough of manhattan, room, residential building)2025-12-10v41 / 196pendingNo
1973gpt-5Laconia (X1) house mouse fecal samples (16S) (common mus musculus, site, subbasement, feces, city of laconia, united states of america, borough of the bronx, urban biome, new york city, room, residential building)2025-12-10v41 / 199pendingNo
1973gpt-5Fresh Meadows (Q1) house mouse fecal samples (16S) (common mus musculus, site, queens county, subbasement, feces, united states of america, urban biome, new york city, fresh meadows, room, residential building)2025-12-10v41 / 214pendingNo
1973gpt-5Inter-neighborhood variation: Chelsea (M3) vs Fresh Meadows (Q1) house mouse gut microbiota ( high in queens county fresh meadows compared to commercial building chelsea dyker heights indoor kitchen feed storage space borough of manhattan brooklyn in residential building mus musculus site subbasement feces urban biome new york city room united states of america )2025-12-10v41 / 479pendingNo

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