Experiment ID: 1955

Field Description
nameparkinson’s disease and pd medications have distinct signatures of the gut microbiome (5469442) - gpt-5
proj_id5469442
sraerp016332
date_of_upload10/12/2025 03:59
doi10.1002/mds.26942
modelgpt-5
dbbact_id591
dbbact_linkhttps://dbbact.org/exp_info/591
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
seattle0.666667
atlanta0.500000
parkinson's disease0.311111
LOWER IN parkinson's disease0.142857
human adult stage0.045455
control0.008759
LOWER IN control0.008696
united states of america0.006645
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
seattle0.500000
atlanta0.333333
LOWER IN parkinson's disease0.250000
parkinson's disease0.200000
human adult stage0.023256
LOWER IN control0.004545
control0.004444
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
city of albany1.000000
seattle1.000000
human house1.000000
human adult stage1.000000
homo sapiens1.000000
atlanta1.000000
parkinson's disease0.700000
treatment0.400000
control0.300000
benztropine0.200000
clinical treatment protocol0.200000
trihexyphenidyl0.200000
carbidopa0.200000
no comt inhibitor0.200000
opicapone0.200000
tolcapone0.200000
levodopa0.200000
entacapone0.200000
LOWER IN parkinson's disease0.100000
LOWER IN control0.100000
Number of experiments associating the term to the sequence
TermScore
benztropine1.000000
clinical treatment protocol1.000000
feces1.000000
trihexyphenidyl1.000000
parkinson's disease1.000000
united states of america1.000000
city of albany1.000000
seattle1.000000
human house1.000000
human adult stage1.000000
homo sapiens1.000000
atlanta1.000000
treatment1.000000
control1.000000
carbidopa1.000000
no comt inhibitor1.000000
opicapone1.000000
tolcapone1.000000
levodopa1.000000
entacapone1.000000
LOWER IN parkinson's disease1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1955gpt-5Control human stool samples (dominant feces, city of albany, united states of america, seattle, human house, human adult stage, homo sapiens, atlanta, control)2025-12-10v41 / 17pendingNo
1955gpt-5PD patients on anticholinergics (stool) (dominant benztropine, clinical treatment protocol, feces, trihexyphenidyl, parkinson's disease, united states of america, city of albany, seattle, human house, human adult stage, homo sapiens, atlanta, treatment)2025-12-10v41 / 20pendingNo
1955gpt-5Parkinson's disease human stool samples (dominant feces, parkinson's disease, united states of america, city of albany, seattle, human house, human adult stage, homo sapiens, atlanta)2025-12-10v41 / 21pendingNo
1955gpt-5PD patients on carbidopa/levodopa (stool) + PD patients not on COMT inhibitor (stool) + PD patients on COMT inhibitor (stool) (dominant carbidopa, feces, parkinson's disease, united states of america, no comt inhibitor, city of albany, seattle, opicapone, human adult stage, tolcapone, levodopa, entacapone, homo sapiens, atlanta, treatment, human house)2025-12-10v41 / 21pendingNo
1955gpt-5Parkinson's disease vs controls (stool microbiome differences) ( high in parkinson's disease compared to control in feces city of albany united states of america seattle human house human adult stage homo sapiens atlanta )2025-12-10v41 / 21pendingNo
1955gpt-5Parkinson's disease vs controls (stool microbiome differences) ( high in control compared to parkinson's disease in feces city of albany united states of america seattle human house human adult stage homo sapiens atlanta )2025-12-10v41 / 32pendingNo
1955gpt-5PD patients on carbidopa/levodopa (stool) + PD patients not on COMT inhibitor (stool) + PD patients on COMT inhibitor (stool) (common carbidopa, feces, parkinson's disease, united states of america, no comt inhibitor, city of albany, seattle, opicapone, human adult stage, tolcapone, levodopa, entacapone, homo sapiens, atlanta, treatment, human house)2025-12-10v41 / 44pendingNo
1955gpt-5Parkinson's disease human stool samples (common feces, parkinson's disease, united states of america, city of albany, seattle, human house, human adult stage, homo sapiens, atlanta)2025-12-10v41 / 47pendingNo
1955gpt-5Control human stool samples (common feces, city of albany, united states of america, seattle, human house, human adult stage, homo sapiens, atlanta, control)2025-12-10v41 / 56pendingNo
1955gpt-5PD patients on anticholinergics (stool) (common benztropine, clinical treatment protocol, feces, trihexyphenidyl, parkinson's disease, united states of america, city of albany, seattle, human house, human adult stage, homo sapiens, atlanta, treatment)2025-12-10v41 / 107pendingNo

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