Experiment ID: 1946

Field Description
nameinfluence of whole-wheat consumption on fecal microbial community structure of obese diabetic mice (4768707) - gpt-5
proj_id4768707
sraprjna281761
date_of_upload10/12/2025 03:45
doi10.7717/peerj.1702
modelgpt-5
dbbact_id39
dbbact_linkhttps://dbbact.org/exp_info/39
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
whole wheat diet0.500000
diabetes mellitus0.444444
wheat0.285714
LOWER IN triticum aestivum0.250000
LOWER IN whole wheat diet0.250000
LOWER IN wheat0.250000
LOWER IN diabetes mellitus0.222222
LOWER IN obesity0.181818
triticum aestivum0.142857
obesity0.121212
male organism0.111111
mus musculus0.027027
LOWER IN control0.008929
control0.008795
united states of america0.006645
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
whole wheat diet1.000000
LOWER IN triticum aestivum0.500000
LOWER IN whole wheat diet0.500000
LOWER IN wheat0.500000
diabetes mellitus0.333333
LOWER IN diabetes mellitus0.333333
wheat0.250000
LOWER IN obesity0.200000
triticum aestivum0.090909
obesity0.066667
male organism0.058824
mus musculus0.013699
LOWER IN control0.004545
control0.004444
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
pullman1.000000
male organism1.000000
mus musculus1.000000
laboratory facility1.000000
diabetes mellitus0.666667
obesity0.666667
control0.416667
triticum aestivum0.333333
dietary supplementation0.333333
wheat0.333333
whole wheat diet0.333333
phenotype0.333333
LOWER IN control0.250000
LOWER IN triticum aestivum0.166667
LOWER IN whole wheat diet0.166667
LOWER IN wheat0.166667
LOWER IN dietary supplementation0.166667
LOWER IN phenotype0.166667
LOWER IN diabetes mellitus0.166667
LOWER IN obesity0.166667
Number of experiments associating the term to the sequence
TermScore
triticum aestivum1.000000
feces1.000000
diabetes mellitus1.000000
united states of america1.000000
pullman1.000000
dietary supplementation1.000000
wheat1.000000
male organism1.000000
obesity1.000000
whole wheat diet1.000000
mus musculus1.000000
laboratory facility1.000000
control1.000000
phenotype1.000000
LOWER IN triticum aestivum1.000000
LOWER IN whole wheat diet1.000000
LOWER IN wheat1.000000
LOWER IN dietary supplementation1.000000
LOWER IN phenotype1.000000
LOWER IN control1.000000
LOWER IN diabetes mellitus1.000000
LOWER IN obesity1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1946gpt-5Whole-wheat supplemented obese mouse fecal samples (dominant triticum aestivum, feces, diabetes mellitus, united states of america, pullman, dietary supplementation, wheat, male organism, obesity, whole wheat diet, mus musculus, laboratory facility)2025-12-10v41 / 16pendingNo
1946gpt-5Lean mouse fecal samples (dominant united states of america, feces, phenotype, pullman, male organism, mus musculus, laboratory facility)2025-12-10v41 / 17pendingNo
1946gpt-5Obese control mouse fecal samples (dominant control, feces, diabetes mellitus, united states of america, pullman, male organism, obesity, mus musculus, laboratory facility)2025-12-10v41 / 20pendingNo
1946gpt-5Obesity effect on gut microbiome (obese vs lean mice) ( high in phenotype compared to obesity control diabetes mellitus in united states of america feces pullman male organism mus musculus laboratory facility )2025-12-10v41 / 24pendingNo
1946gpt-5Microbiome in obesity with and without whole-wheat supplementation vs lean baseline ( high in phenotype compared to control triticum aestivum diabetes mellitus dietary supplementation wheat obesity whole wheat diet in united states of america feces pullman male organism mus musculus laboratory facility )2025-12-10v41 / 28pendingNo
1946gpt-5Microbiome in obesity with and without whole-wheat supplementation vs lean baseline ( high in control triticum aestivum diabetes mellitus dietary supplementation wheat obesity whole wheat diet compared to phenotype in united states of america feces pullman male organism mus musculus laboratory facility )2025-12-10v41 / 33pendingNo
1946gpt-5Dietary whole-wheat supplementation effect in obese mice (supplemented vs obese control) ( high in triticum aestivum whole wheat diet wheat dietary supplementation compared to control in united states of america feces diabetes mellitus pullman male organism obesity mus musculus laboratory facility )2025-12-10v41 / 72pendingNo
1946gpt-5Obesity effect on gut microbiome (obese vs lean mice) ( high in obesity control diabetes mellitus compared to phenotype in united states of america feces pullman male organism mus musculus laboratory facility )2025-12-10v41 / 80pendingNo
1946gpt-5Dietary whole-wheat supplementation effect in obese mice (supplemented vs obese control) ( high in control compared to triticum aestivum whole wheat diet wheat dietary supplementation in united states of america feces diabetes mellitus pullman male organism obesity mus musculus laboratory facility )2025-12-10v41 / 88pendingNo
1946gpt-5Lean mouse fecal samples (common united states of america, feces, phenotype, pullman, male organism, mus musculus, laboratory facility)2025-12-10v41 / 120pendingNo
1946gpt-5Obese control mouse fecal samples (common control, feces, diabetes mellitus, united states of america, pullman, male organism, obesity, mus musculus, laboratory facility)2025-12-10v41 / 160pendingNo
1946gpt-5Whole-wheat supplemented obese mouse fecal samples (common triticum aestivum, feces, diabetes mellitus, united states of america, pullman, dietary supplementation, wheat, male organism, obesity, whole wheat diet, mus musculus, laboratory facility)2025-12-10v41 / 179pendingNo

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