Experiment ID: 1941

Field Description
namesalt-responsive gut commensal modulates th17 axis and disease (6070150) - gpt-5
proj_id6070150
sraprjna400793
date_of_upload10/12/2025 03:23
doi10.1038/nature24628
modelgpt-5
dbbact_id248
dbbact_linkhttps://dbbact.org/exp_info/248
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
early timepoint0.307692
LOWER IN early timepoint0.222222
male organism0.111111
germany0.076923
mus musculus0.027027
research facility0.010417
control0.008850
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
early timepoint0.250000
LOWER IN early timepoint0.250000
male organism0.058824
germany0.040000
mus musculus0.013699
research facility0.005236
control0.004444
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
day +141.000000
germany1.000000
sodium chloride1.000000
control1.000000
research facility1.000000
male organism1.000000
mus musculus1.000000
feces1.000000
berlin1.000000
sodium chloride salt1.000000
days +15 to +280.400000
post-treatment recovery0.400000
early timepoint0.400000
recovery phase0.400000
day -20.400000
day -10.400000
days +1 to +30.400000
baseline0.400000
hsd cohort0.400000
LOWER IN day -20.200000
LOWER IN early timepoint0.200000
LOWER IN days +15 to +280.200000
LOWER IN day -10.200000
LOWER IN days +1 to +30.200000
LOWER IN hsd cohort0.200000
LOWER IN post-treatment recovery0.200000
LOWER IN recovery phase0.200000
LOWER IN baseline0.200000
Number of experiments associating the term to the sequence
TermScore
day +141.000000
germany1.000000
sodium chloride1.000000
control1.000000
research facility1.000000
male organism1.000000
mus musculus1.000000
feces1.000000
berlin1.000000
sodium chloride salt1.000000
days +15 to +281.000000
post-treatment recovery1.000000
early timepoint1.000000
recovery phase1.000000
day -21.000000
day -11.000000
days +1 to +31.000000
baseline1.000000
hsd cohort1.000000
LOWER IN day -21.000000
LOWER IN early timepoint1.000000
LOWER IN days +15 to +281.000000
LOWER IN day -11.000000
LOWER IN days +1 to +31.000000
LOWER IN hsd cohort1.000000
LOWER IN post-treatment recovery1.000000
LOWER IN recovery phase1.000000
LOWER IN baseline1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1941gpt-5Normal-salt control mouse fecal samples (baseline day -1) + Post-HSD recovery on NSD (HSD cohort, days +15 to +28) + High-salt diet mouse fecal samples (day +14) + High-salt diet mouse fecal samples (days +1 to +3) + Pre-HSD baseline fecal samples (HSD cohort, day -2) (dominant days +15 to +28, germany, post-treatment recovery, research facility, berlin, early timepoint, day +14, control, recovery phase, sodium chloride, mus musculus, feces, day -2, day -1, days +1 to +3, baseline, sodium chloride salt, hsd cohort, male organism)2025-12-10v41 / 22pendingNo
1941gpt-5Normal-salt control mouse fecal samples (day +14) (dominant day +14, germany, sodium chloride, control, research facility, male organism, mus musculus, feces, berlin, sodium chloride salt)2025-12-10v41 / 26pendingNo
1941gpt-5High-salt diet at day +14 vs normal-salt control at day +14 ( high in compared to day -2 early timepoint days +15 to +28 day -1 days +1 to +3 hsd cohort post-treatment recovery recovery phase baseline in day +14 germany control sodium chloride research facility male organism mus musculus feces berlin sodium chloride salt )2025-12-10v41 / 39pendingNo
1941gpt-5Normal-salt control mouse fecal samples (baseline day -1) + Post-HSD recovery on NSD (HSD cohort, days +15 to +28) + High-salt diet mouse fecal samples (day +14) + High-salt diet mouse fecal samples (days +1 to +3) + Pre-HSD baseline fecal samples (HSD cohort, day -2) (common days +15 to +28, germany, post-treatment recovery, research facility, berlin, early timepoint, day +14, control, recovery phase, sodium chloride, mus musculus, feces, day -2, day -1, days +1 to +3, baseline, sodium chloride salt, hsd cohort, male organism)2025-12-10v41 / 161pendingNo
1941gpt-5Normal-salt control mouse fecal samples (day +14) (common day +14, germany, sodium chloride, control, research facility, male organism, mus musculus, feces, berlin, sodium chloride salt)2025-12-10v41 / 209pendingNo

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