Experiment ID: 1939

Field Description
namenew york city house mice (mus musculus) as potential reservoirs for pathogenic bacteria and antimicrobial resistance determinants (5904414) - gpt-5
proj_id5904414
srasrp136544
date_of_upload10/12/2025 03:18
doi10.1128/mbio.00624-18
modelgpt-5
dbbact_id337
dbbact_linkhttps://dbbact.org/exp_info/337
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
urban biome0.400000
new york city0.250000
mus musculus0.027027
united states of america0.006645
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
urban biome0.250000
new york city0.142857
mus musculus0.013699
united states of america0.003333
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1939gpt-5Bronx vs Manhattan: Laconia (X1) vs Upper West Side (M2) house mouse gut microbiota ( high in borough of manhattan upper west side compared to borough of the bronx laconia in subbasement mus musculus feces room urban biome site united states of america residential building new york city )2025-12-10v41 / 2pendingNo
1939gpt-5Bronx vs Manhattan: Laconia (X1) vs Upper West Side (M2) house mouse gut microbiota ( high in borough of the bronx laconia compared to borough of manhattan upper west side in subbasement mus musculus feces room urban biome site united states of america residential building new york city )2025-12-10v41 / 3pendingNo
1939gpt-5Brooklyn vs Manhattan: Dyker Heights (K1) vs Chelsea (M3) house mouse gut microbiota ( high in subbasement borough of manhattan room residential building chelsea compared to dyker heights brooklyn feed storage space commercial building indoor kitchen in mus musculus feces urban biome site united states of america new york city )2025-12-10v41 / 4pendingNo
1939gpt-5Brooklyn vs Manhattan: Dyker Heights (K1) vs Chelsea (M3) house mouse gut microbiota ( high in dyker heights brooklyn feed storage space commercial building indoor kitchen compared to subbasement borough of manhattan room residential building chelsea in mus musculus feces urban biome site united states of america new york city )2025-12-10v41 / 7pendingNo
1939gpt-5Fresh Meadows (Q1) house mouse fecal samples (16S) (dominant subbasement, mus musculus, feces, room, urban biome, site, united states of america, residential building, new york city, queens county, fresh meadows)2025-12-10v41 / 16pendingNo
1939gpt-5Upper West Side (M2) house mouse fecal samples (16S) (dominant subbasement, mus musculus, feces, borough of manhattan, room, upper west side, urban biome, site, united states of america, residential building, new york city)2025-12-10v41 / 16pendingNo
1939gpt-5Chelsea (M3) house mouse fecal samples (16S) (dominant subbasement, mus musculus, feces, borough of manhattan, room, urban biome, site, united states of america, residential building, chelsea, new york city)2025-12-10v41 / 17pendingNo
1939gpt-5Dyker Heights (K1) house mouse fecal samples (16S) (dominant mus musculus, dyker heights, feces, urban biome, brooklyn, feed storage space, site, commercial building, united states of america, indoor kitchen, new york city)2025-12-10v41 / 17pendingNo
1939gpt-5Manhattan neighborhoods: Chelsea (M3) vs Upper West Side (M2) house mouse gut microbiota ( high in chelsea compared to upper west side in subbasement mus musculus feces borough of manhattan room urban biome site united states of america residential building new york city )2025-12-10v41 / 18pendingNo
1939gpt-5Laconia (X1) house mouse fecal samples (16S) (dominant subbasement, mus musculus, feces, room, urban biome, site, laconia, united states of america, residential building, borough of the bronx, new york city)2025-12-10v41 / 22pendingNo
1939gpt-5High-sample neighborhoods vs low-sample neighborhoods (stability across sampling depth) ( high in queens county fresh meadows chelsea compared to dyker heights upper west side brooklyn feed storage space laconia commercial building borough of the bronx indoor kitchen in subbasement mus musculus feces borough of manhattan room urban biome site united states of america residential building new york city )2025-12-10v41 / 48pendingNo
1939gpt-5High-sample neighborhoods vs low-sample neighborhoods (stability across sampling depth) ( high in dyker heights upper west side brooklyn feed storage space laconia commercial building borough of the bronx indoor kitchen compared to queens county fresh meadows chelsea in subbasement mus musculus feces borough of manhattan room urban biome site united states of america residential building new york city )2025-12-10v41 / 59pendingNo
1939gpt-5Manhattan neighborhoods: Chelsea (M3) vs Upper West Side (M2) house mouse gut microbiota ( high in upper west side compared to chelsea in subbasement mus musculus feces borough of manhattan room urban biome site united states of america residential building new york city )2025-12-10v41 / 70pendingNo
1939gpt-5Dyker Heights (K1) house mouse fecal samples (16S) (common mus musculus, dyker heights, feces, urban biome, brooklyn, feed storage space, site, commercial building, united states of america, indoor kitchen, new york city)2025-12-10v41 / 133pendingNo
1939gpt-5Outer-borough mice vs Manhattan mice ( high in chelsea borough of manhattan upper west side compared to dyker heights brooklyn feed storage space laconia commercial building borough of the bronx indoor kitchen queens county fresh meadows in subbasement mus musculus feces room urban biome site united states of america residential building new york city )2025-12-10v41 / 170pendingNo
1939gpt-5Chelsea (M3) house mouse fecal samples (16S) (common subbasement, mus musculus, feces, borough of manhattan, room, urban biome, site, united states of america, residential building, chelsea, new york city)2025-12-10v41 / 177pendingNo
1939gpt-5Inter-neighborhood variation: Chelsea (M3) vs Fresh Meadows (Q1) house mouse gut microbiota ( high in chelsea borough of manhattan compared to queens county fresh meadows in subbasement mus musculus feces room urban biome site united states of america residential building new york city )2025-12-10v41 / 180pendingNo
1939gpt-5Upper West Side (M2) house mouse fecal samples (16S) (common subbasement, mus musculus, feces, borough of manhattan, room, upper west side, urban biome, site, united states of america, residential building, new york city)2025-12-10v41 / 196pendingNo
1939gpt-5Laconia (X1) house mouse fecal samples (16S) (common subbasement, mus musculus, feces, room, urban biome, site, laconia, united states of america, residential building, borough of the bronx, new york city)2025-12-10v41 / 199pendingNo
1939gpt-5Fresh Meadows (Q1) house mouse fecal samples (16S) (common subbasement, mus musculus, feces, room, urban biome, site, united states of america, residential building, new york city, queens county, fresh meadows)2025-12-10v41 / 214pendingNo
1939gpt-5Outer-borough mice vs Manhattan mice ( high in dyker heights brooklyn feed storage space laconia commercial building borough of the bronx indoor kitchen queens county fresh meadows compared to chelsea borough of manhattan upper west side in subbasement mus musculus feces room urban biome site united states of america residential building new york city )2025-12-10v41 / 372pendingNo
1939gpt-5Inter-neighborhood variation: Chelsea (M3) vs Fresh Meadows (Q1) house mouse gut microbiota ( high in queens county fresh meadows compared to chelsea borough of manhattan in subbasement mus musculus feces room urban biome site united states of america residential building new york city )2025-12-10v41 / 450pendingNo

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