Experiment ID: 1914

Field Description
nameinfluence of whole-wheat consumption on fecal microbial community structure of obese diabetic mice (4768707) - gpt-5
proj_id4768707
sraprjna281761
date_of_upload10/12/2025 02:23
doi10.7717/peerj.1702
modelgpt-5
dbbact_id39
dbbact_linkhttps://dbbact.org/exp_info/39
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
diabetes mellitus0.444444
LOWER IN diabetes mellitus0.222222
male organism0.111111
mus musculus0.027027
LOWER IN control0.008929
control0.008795
united states of america0.006645
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
diabetes mellitus0.333333
LOWER IN diabetes mellitus0.333333
male organism0.058824
mus musculus0.013699
LOWER IN control0.004545
control0.004444
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
laboratory facility1.000000
male organism1.000000
united states of america1.000000
feces1.000000
pullman1.000000
mus musculus1.000000
diabetes mellitus0.666667
obese phenotype0.666667
control0.416667
whole-wheat0.333333
dietary supplementation0.333333
whole-wheat diet0.333333
lean phenotype0.333333
LOWER IN control0.250000
LOWER IN lean phenotype0.166667
LOWER IN whole-wheat0.166667
LOWER IN whole-wheat diet0.166667
LOWER IN dietary supplementation0.166667
LOWER IN diabetes mellitus0.166667
LOWER IN obese phenotype0.166667
Number of experiments associating the term to the sequence
TermScore
laboratory facility1.000000
whole-wheat1.000000
male organism1.000000
united states of america1.000000
feces1.000000
diabetes mellitus1.000000
pullman1.000000
dietary supplementation1.000000
whole-wheat diet1.000000
mus musculus1.000000
obese phenotype1.000000
control1.000000
lean phenotype1.000000
LOWER IN lean phenotype1.000000
LOWER IN whole-wheat1.000000
LOWER IN whole-wheat diet1.000000
LOWER IN dietary supplementation1.000000
LOWER IN control1.000000
LOWER IN diabetes mellitus1.000000
LOWER IN obese phenotype1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1914gpt-5Whole-wheat supplemented obese mouse fecal samples (dominant laboratory facility, whole-wheat, male organism, united states of america, feces, diabetes mellitus, pullman, dietary supplementation, whole-wheat diet, mus musculus, obese phenotype)2025-12-10v41 / 16pendingNo
1914gpt-5Lean mouse fecal samples (dominant laboratory facility, male organism, united states of america, feces, pullman, lean phenotype, mus musculus)2025-12-10v41 / 17pendingNo
1914gpt-5Obese control mouse fecal samples (dominant laboratory facility, male organism, united states of america, feces, diabetes mellitus, pullman, control, mus musculus, obese phenotype)2025-12-10v41 / 20pendingNo
1914gpt-5Obesity effect on gut microbiome (obese vs lean mice) ( high in lean phenotype compared to control diabetes mellitus obese phenotype in laboratory facility male organism united states of america feces pullman mus musculus )2025-12-10v41 / 22pendingNo
1914gpt-5Microbiome in obesity with and without whole-wheat supplementation vs lean baseline ( high in lean phenotype compared to whole-wheat diabetes mellitus dietary supplementation whole-wheat diet control obese phenotype in laboratory facility male organism united states of america feces pullman mus musculus )2025-12-10v41 / 29pendingNo
1914gpt-5Microbiome in obesity with and without whole-wheat supplementation vs lean baseline ( high in whole-wheat diabetes mellitus dietary supplementation whole-wheat diet control obese phenotype compared to lean phenotype in laboratory facility male organism united states of america feces pullman mus musculus )2025-12-10v41 / 36pendingNo
1914gpt-5Dietary whole-wheat supplementation effect in obese mice (supplemented vs obese control) ( high in whole-wheat whole-wheat diet dietary supplementation compared to control in laboratory facility male organism united states of america feces diabetes mellitus pullman mus musculus obese phenotype )2025-12-10v41 / 71pendingNo
1914gpt-5Dietary whole-wheat supplementation effect in obese mice (supplemented vs obese control) ( high in control compared to whole-wheat whole-wheat diet dietary supplementation in laboratory facility male organism united states of america feces diabetes mellitus pullman mus musculus obese phenotype )2025-12-10v41 / 85pendingNo
1914gpt-5Obesity effect on gut microbiome (obese vs lean mice) ( high in control diabetes mellitus obese phenotype compared to lean phenotype in laboratory facility male organism united states of america feces pullman mus musculus )2025-12-10v41 / 86pendingNo
1914gpt-5Lean mouse fecal samples (common laboratory facility, male organism, united states of america, feces, pullman, lean phenotype, mus musculus)2025-12-10v41 / 120pendingNo
1914gpt-5Obese control mouse fecal samples (common laboratory facility, male organism, united states of america, feces, diabetes mellitus, pullman, control, mus musculus, obese phenotype)2025-12-10v41 / 160pendingNo
1914gpt-5Whole-wheat supplemented obese mouse fecal samples (common laboratory facility, whole-wheat, male organism, united states of america, feces, diabetes mellitus, pullman, dietary supplementation, whole-wheat diet, mus musculus, obese phenotype)2025-12-10v41 / 179pendingNo

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