Experiment ID: 1901

Field Description
namestudy of cattle microbiota in different regions of kazakhstan using 16s metabarcoding analysis (9525287) - gpt-5
proj_id9525287
sraprjna847733
date_of_upload07/12/2025 03:35
doi10.1038/s41598-022-20732-4
modelgpt-5
dbbact_id940
dbbact_linkhttps://dbbact.org/exp_info/940
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
cattle0.666667
kazakhstan0.500000
pasture0.380952
LOWER IN pasture0.181818
bos taurus0.100000
farm0.045455
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
cattle0.500000
LOWER IN pasture0.500000
kazakhstan0.333333
pasture0.333333
bos taurus0.052632
farm0.023256
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
farm1.000000
feces1.000000
bos taurus1.000000
kazakhstan1.000000
cattle1.000000
hay-concentrate feeding0.500000
pasture0.444444
silage0.277778
haylage-hay-concentrate feeding0.277778
LOWER IN hay-concentrate feeding0.166667
LOWER IN silage0.166667
LOWER IN haylage-hay-concentrate feeding0.166667
LOWER IN pasture0.111111
Number of experiments associating the term to the sequence
TermScore
farm1.000000
feces1.000000
bos taurus1.000000
kazakhstan1.000000
cattle1.000000
pasture1.000000
silage1.000000
hay-concentrate feeding1.000000
haylage-hay-concentrate feeding1.000000
LOWER IN hay-concentrate feeding1.000000
LOWER IN silage1.000000
LOWER IN pasture1.000000
LOWER IN haylage-hay-concentrate feeding1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1901gpt-5North–South gradient: Northern vs Southern Kazakhstan cattle fecal microbiome ( high in haylage-hay-concentrate feeding compared to in farm feces bos taurus kazakhstan cattle hay-concentrate feeding )2025-12-07v31 / 2pendingNo
1901gpt-5Southeast Kazakhstan (Almaty region) cattle fecal samples (dominant farm, feces, bos taurus, silage, kazakhstan, cattle, pasture)2025-12-07v31 / 9pendingNo
1901gpt-5Western Kazakhstan cattle fecal samples (dominant farm, feces, bos taurus, kazakhstan, cattle, pasture)2025-12-07v31 / 11pendingNo
1901gpt-5Macro-scale geography: Southern + Western (warmer/arid) vs Northern Kazakhstan (cooler/continental) ( high in compared to haylage-hay-concentrate feeding hay-concentrate feeding in farm feces bos taurus kazakhstan cattle )2025-12-07v31 / 11pendingNo
1901gpt-5Southern Kazakhstan cattle fecal samples (dominant farm, feces, bos taurus, kazakhstan, cattle, hay-concentrate feeding)2025-12-07v31 / 14pendingNo
1901gpt-5Northern Kazakhstan cattle fecal samples (dominant farm, feces, bos taurus, kazakhstan, cattle, haylage-hay-concentrate feeding, hay-concentrate feeding)2025-12-07v31 / 14pendingNo
1901gpt-5North–South gradient: Northern vs Southern Kazakhstan cattle fecal microbiome ( high in compared to haylage-hay-concentrate feeding in farm feces bos taurus kazakhstan cattle hay-concentrate feeding )2025-12-07v31 / 15pendingNo
1901gpt-5Macro-scale geography: Southern + Western (warmer/arid) vs Northern Kazakhstan (cooler/continental) ( high in haylage-hay-concentrate feeding hay-concentrate feeding compared to in farm feces bos taurus kazakhstan cattle )2025-12-07v31 / 21pendingNo
1901gpt-5Regional variation in cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in silage compared to in farm feces bos taurus kazakhstan cattle pasture )2025-12-07v31 / 31pendingNo
1901gpt-5Regional variation in cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in haylage-hay-concentrate feeding hay-concentrate feeding compared to pasture silage in farm feces bos taurus kazakhstan cattle )2025-12-07v31 / 51pendingNo
1901gpt-5Regional variation in cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in pasture silage compared to haylage-hay-concentrate feeding hay-concentrate feeding in farm feces bos taurus kazakhstan cattle )2025-12-07v31 / 83pendingNo
1901gpt-5Regional variation in cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in hay-concentrate feeding compared to pasture silage in farm feces bos taurus kazakhstan cattle )2025-12-07v31 / 99pendingNo
1901gpt-5Regional variation in cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in compared to silage in farm feces bos taurus kazakhstan cattle pasture )2025-12-07v31 / 111pendingNo
1901gpt-5Regional variation in cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in pasture silage compared to hay-concentrate feeding in farm feces bos taurus kazakhstan cattle )2025-12-07v31 / 167pendingNo
1901gpt-5Northern Kazakhstan cattle fecal samples (common farm, feces, bos taurus, kazakhstan, cattle, haylage-hay-concentrate feeding, hay-concentrate feeding)2025-12-07v31 / 257pendingNo
1901gpt-5Southern Kazakhstan cattle fecal samples (common farm, feces, bos taurus, kazakhstan, cattle, hay-concentrate feeding)2025-12-07v31 / 436pendingNo
1901gpt-5Southeast Kazakhstan (Almaty region) cattle fecal samples (common farm, feces, bos taurus, silage, kazakhstan, cattle, pasture)2025-12-07v31 / 543pendingNo
1901gpt-5Western Kazakhstan cattle fecal samples (common farm, feces, bos taurus, kazakhstan, cattle, pasture)2025-12-07v31 / 575pendingNo

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