Experiment ID: 1898

Field Description
namestudy of cattle microbiota in different regions of kazakhstan using 16s metabarcoding analysis (9525287) - gpt-5
proj_id9525287
sraprjna847733
date_of_upload03/12/2025 02:29
doi10.1038/s41598-022-20732-4
modelgpt-5
dbbact_id940
dbbact_linkhttps://dbbact.org/exp_info/940
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
LOWER IN kazakhstan0.516129
kazakhstan0.450704
west kazakhstan province0.357143
LOWER IN farm0.274510
LOWER IN bos taurus0.274510
pasture0.263158
LOWER IN west kazakhstan province0.206897
LOWER IN pasture0.206897
bos taurus0.099526
LOWER IN feces0.060086
farm0.045356
feces0.004576
Fraction of dbbact annotations with this term covered by the query
TermScore
west kazakhstan province1.000000
LOWER IN kazakhstan1.000000
LOWER IN west kazakhstan province0.500000
LOWER IN pasture0.500000
pasture0.333333
kazakhstan0.333333
LOWER IN farm0.250000
LOWER IN bos taurus0.250000
bos taurus0.052632
LOWER IN feces0.033333
farm0.023256
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1898gpt-5Southeast Kazakhstan (Almaty region) cattle fecal samples (dominant farm, almaty province, almaty city, kazakhstan, bos taurus, hay-concentrate feeding, feces)2025-12-03v31 / 9pendingNo
1898gpt-5Western Kazakhstan cattle fecal samples (dominant west kazakhstan province, province (kazakhstan), pasture, farm, bos taurus, feces)2025-12-03v31 / 11pendingNo
1898gpt-5North Kazakhstan (Akmola region) cattle fecal samples (dominant farm, kazakhstan, bos taurus, hay-concentrate feeding, haylage-hay-concentrate feeding, bayse, feces)2025-12-03v31 / 14pendingNo
1898gpt-5South Kazakhstan (Mankent) cattle fecal samples (dominant farm, bos taurus, feces, hay-concentrate feeding, turkestan region, kazakhstan, mankent)2025-12-03v31 / 14pendingNo
1898gpt-5North vs South Kazakhstan cattle gut microbiome ( high in farm bos taurus feces turkestan region kazakhstan mankent compared to farm kazakhstan bos taurus haylage-hay-concentrate feeding bayse feces in hay-concentrate feeding )2025-12-03v31 / 16pendingNo
1898gpt-5Aggregate comparison: Northern (Akmola) vs Western + South Kazakhstan cattle ( high in compared to farm kazakhstan bos taurus hay-concentrate feeding haylage-hay-concentrate feeding bayse feces in )2025-12-03v31 / 16pendingNo
1898gpt-5Aggregate comparison: Northern (Akmola) vs Western + South Kazakhstan cattle ( high in farm kazakhstan bos taurus hay-concentrate feeding haylage-hay-concentrate feeding bayse feces compared to in )2025-12-03v31 / 19pendingNo
1898gpt-5Latitudinal gradient: North (Akmola) vs Southeast (Almaty) Kazakhstan cattle ( high in haylage-hay-concentrate feeding bayse compared to almaty province almaty city in farm kazakhstan bos taurus hay-concentrate feeding feces )2025-12-03v31 / 37pendingNo
1898gpt-5Regional variation in cattle gut microbiome: Western vs Southeast Kazakhstan ( high in almaty province hay-concentrate feeding kazakhstan almaty city compared to west kazakhstan province pasture province (kazakhstan) in farm bos taurus feces )2025-12-03v31 / 39pendingNo
1898gpt-5Aggregate comparison: Southern regions (West + South) vs Southeast (Almaty) Kazakhstan cattle ( high in compared to farm almaty province almaty city kazakhstan bos taurus hay-concentrate feeding feces in )2025-12-03v31 / 50pendingNo
1898gpt-5West vs North Kazakhstan cattle gut microbiome ( high in haylage-hay-concentrate feeding bayse hay-concentrate feeding kazakhstan compared to west kazakhstan province pasture province (kazakhstan) in farm bos taurus feces )2025-12-03v31 / 63pendingNo
1898gpt-5Latitudinal gradient: North (Akmola) vs Southeast (Almaty) Kazakhstan cattle ( high in almaty province almaty city compared to haylage-hay-concentrate feeding bayse in farm kazakhstan bos taurus hay-concentrate feeding feces )2025-12-03v31 / 70pendingNo
1898gpt-5South-central contrast: South (Mankent) vs Southeast (Almaty) Kazakhstan cattle ( high in farm bos taurus feces turkestan region kazakhstan mankent compared to farm almaty province almaty city kazakhstan bos taurus feces in hay-concentrate feeding )2025-12-03v31 / 106pendingNo
1898gpt-5Regional variation in cattle gut microbiome: Western vs Southeast Kazakhstan ( high in west kazakhstan province pasture province (kazakhstan) compared to almaty province hay-concentrate feeding kazakhstan almaty city in farm bos taurus feces )2025-12-03v31 / 118pendingNo
1898gpt-5West vs South Kazakhstan cattle gut microbiome ( high in turkestan region farm bos taurus feces hay-concentrate feeding kazakhstan mankent compared to west kazakhstan province province (kazakhstan) pasture farm bos taurus feces in )2025-12-03v31 / 146pendingNo
1898gpt-5South-central contrast: South (Mankent) vs Southeast (Almaty) Kazakhstan cattle ( high in farm almaty province almaty city kazakhstan bos taurus feces compared to farm bos taurus feces turkestan region kazakhstan mankent in hay-concentrate feeding )2025-12-03v31 / 160pendingNo
1898gpt-5Aggregate comparison: Southern regions (West + South) vs Southeast (Almaty) Kazakhstan cattle ( high in farm almaty province almaty city kazakhstan bos taurus hay-concentrate feeding feces compared to in )2025-12-03v31 / 191pendingNo
1898gpt-5North Kazakhstan (Akmola region) cattle fecal samples (common farm, kazakhstan, bos taurus, hay-concentrate feeding, haylage-hay-concentrate feeding, bayse, feces)2025-12-03v31 / 257pendingNo
1898gpt-5West vs North Kazakhstan cattle gut microbiome ( high in west kazakhstan province pasture province (kazakhstan) compared to haylage-hay-concentrate feeding bayse hay-concentrate feeding kazakhstan in farm bos taurus feces )2025-12-03v31 / 288pendingNo
1898gpt-5West vs South Kazakhstan cattle gut microbiome ( high in west kazakhstan province province (kazakhstan) pasture farm bos taurus feces compared to turkestan region farm bos taurus feces hay-concentrate feeding kazakhstan mankent in )2025-12-03v31 / 415pendingNo
1898gpt-5South Kazakhstan (Mankent) cattle fecal samples (common farm, bos taurus, feces, hay-concentrate feeding, turkestan region, kazakhstan, mankent)2025-12-03v31 / 436pendingNo
1898gpt-5Southeast Kazakhstan (Almaty region) cattle fecal samples (common farm, almaty province, almaty city, kazakhstan, bos taurus, hay-concentrate feeding, feces)2025-12-03v31 / 543pendingNo
1898gpt-5Western Kazakhstan cattle fecal samples (common west kazakhstan province, province (kazakhstan), pasture, farm, bos taurus, feces)2025-12-03v31 / 575pendingNo

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