Experiment ID: 1897

Field Description
namestudy of cattle microbiota in different regions of kazakhstan using 16s metabarcoding analysis (9525287) - gpt-5
proj_id9525287
sraprjna847733
date_of_upload03/12/2025 02:20
doi10.1038/s41598-022-20732-4
modelgpt-5
dbbact_id940
dbbact_linkhttps://dbbact.org/exp_info/940
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
ovariectomized female0.370370
kazakhstan0.333333
LOWER IN kazakhstan0.285714
pasture0.260870
cattle0.256410
mixed0.256410
LOWER IN pasture0.256410
west kazakhstan province0.222222
LOWER IN ovariectomized female0.222222
LOWER IN mixed0.181818
LOWER IN cattle0.181818
LOWER IN farm0.153846
LOWER IN bos taurus0.153846
LOWER IN west kazakhstan province0.074074
bos taurus0.052632
LOWER IN male0.037037
LOWER IN female0.031746
LOWER IN feces0.030769
farm0.023256
male0.019960
female0.012392
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
west kazakhstan province1.000000
LOWER IN kazakhstan1.000000
ovariectomized female0.333333
cattle0.333333
mixed0.333333
LOWER IN mixed0.333333
LOWER IN pasture0.333333
LOWER IN ovariectomized female0.333333
LOWER IN cattle0.333333
LOWER IN west kazakhstan province0.333333
pasture0.200000
kazakhstan0.200000
LOWER IN farm0.142857
LOWER IN bos taurus0.142857
bos taurus0.027027
LOWER IN male0.019608
LOWER IN female0.017544
LOWER IN feces0.016949
farm0.011765
male0.010101
female0.006289
feces0.001148
Exp. ID User ID Description Date Region Sequences Status Flag
1897gpt-5North–South gradient in cattle gut microbiome: Northern vs Southern Kazakhstan ( high in bos taurus male female sterile farm female reproductive system disease feces female kazakhstan ovariectomized female male cattle haylage-hay-concentrate feeding compared to farm feces beef cattle kazakhstan mankent bos taurus turkestan region in hay-concentrate feeding )2025-12-03v31 / 8pendingNo
1897gpt-5Southeast (Almaty region) Kazakhstan cattle fecal samples (dominant mixed, bos taurus, silage, farm, pasture, feces, kazakhstan)2025-12-03v31 / 9pendingNo
1897gpt-5Alatau breed cattle fecal samples (dominant bos taurus, male, female sterile, farm, female reproductive system disease, pasture, feces, kazakhstan, ovariectomized female, alatau, female, male)2025-12-03v31 / 9pendingNo
1897gpt-5Aberdeen Angus cattle fecal samples (dominant bos taurus, male, female sterile, farm, female reproductive system disease, feces, female, kazakhstan, ovariectomized female, hay-concentrate feeding, male, aberdeen angus)2025-12-03v31 / 9pendingNo
1897gpt-5Western Kazakhstan cattle fecal samples (dominant bos taurus, farm, feces, kazakhstan, cattle, west kazakhstan province, pasture feeding)2025-12-03v31 / 11pendingNo
1897gpt-5Beef-focused international breed vs Alatau: Aberdeen Angus vs Alatau ( high in hay-concentrate feeding aberdeen angus compared to alatau pasture in bos taurus male female sterile farm female reproductive system disease feces female kazakhstan ovariectomized female male )2025-12-03v31 / 15pendingNo
1897gpt-5Kazakh white-headed cattle fecal samples (dominant bos taurus, farm, feces, kazakhstan, hay-concentrate feeding, kazakh white-headed)2025-12-03v31 / 15pendingNo
1897gpt-5Native vs composite dairy/beef breed: Kazakh white-headed vs Alatau ( high in hay-concentrate feeding kazakh white-headed compared to male female sterile female reproductive system disease pasture female ovariectomized female alatau male in bos taurus kazakhstan feces farm )2025-12-03v31 / 16pendingNo
1897gpt-5Breed-associated microbiome differences: Aberdeen Angus vs Kazakh white-headed ( high in kazakh white-headed compared to male female sterile female reproductive system disease female ovariectomized female male aberdeen angus in bos taurus farm feces kazakhstan hay-concentrate feeding )2025-12-03v31 / 21pendingNo
1897gpt-5North–South gradient in cattle gut microbiome: Northern vs Southern Kazakhstan ( high in farm feces beef cattle kazakhstan mankent bos taurus turkestan region compared to bos taurus male female sterile farm female reproductive system disease feces female kazakhstan ovariectomized female male cattle haylage-hay-concentrate feeding in hay-concentrate feeding )2025-12-03v31 / 23pendingNo
1897gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in male female sterile female reproductive system disease female ovariectomized female hay-concentrate feeding male cattle haylage-hay-concentrate feeding compared to mixed silage pasture in bos taurus kazakhstan feces farm )2025-12-03v31 / 28pendingNo
1897gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in mixed silage pasture compared to west kazakhstan province cattle pasture feeding in bos taurus kazakhstan feces farm )2025-12-03v31 / 40pendingNo
1897gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in mixed silage pasture compared to male female sterile female reproductive system disease female ovariectomized female hay-concentrate feeding male cattle haylage-hay-concentrate feeding in bos taurus kazakhstan feces farm )2025-12-03v31 / 58pendingNo
1897gpt-5Breed-associated microbiome differences: Aberdeen Angus vs Kazakh white-headed ( high in male female sterile female reproductive system disease female ovariectomized female male aberdeen angus compared to kazakh white-headed in bos taurus farm feces kazakhstan hay-concentrate feeding )2025-12-03v31 / 86pendingNo
1897gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in farm feces beef cattle hay-concentrate feeding kazakhstan mankent bos taurus turkestan region compared to mixed bos taurus silage farm pasture feces kazakhstan in )2025-12-03v31 / 115pendingNo
1897gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in west kazakhstan province cattle pasture feeding compared to mixed silage pasture in bos taurus kazakhstan feces farm )2025-12-03v31 / 135pendingNo
1897gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in mixed bos taurus silage farm pasture feces kazakhstan compared to farm feces beef cattle hay-concentrate feeding kazakhstan mankent bos taurus turkestan region in )2025-12-03v31 / 152pendingNo
1897gpt-5Beef-focused international breed vs Alatau: Aberdeen Angus vs Alatau ( high in alatau pasture compared to hay-concentrate feeding aberdeen angus in bos taurus male female sterile farm female reproductive system disease feces female kazakhstan ovariectomized female male )2025-12-03v31 / 204pendingNo
1897gpt-5Kazakh white-headed cattle fecal samples (common bos taurus, farm, feces, kazakhstan, hay-concentrate feeding, kazakh white-headed)2025-12-03v31 / 310pendingNo
1897gpt-5Aberdeen Angus cattle fecal samples (common bos taurus, male, female sterile, farm, female reproductive system disease, feces, female, kazakhstan, ovariectomized female, hay-concentrate feeding, male, aberdeen angus)2025-12-03v31 / 469pendingNo
1897gpt-5Native vs composite dairy/beef breed: Kazakh white-headed vs Alatau ( high in male female sterile female reproductive system disease pasture female ovariectomized female alatau male compared to hay-concentrate feeding kazakh white-headed in bos taurus kazakhstan feces farm )2025-12-03v31 / 472pendingNo
1897gpt-5Southeast (Almaty region) Kazakhstan cattle fecal samples (common mixed, bos taurus, silage, farm, pasture, feces, kazakhstan)2025-12-03v31 / 543pendingNo
1897gpt-5Western Kazakhstan cattle fecal samples (common bos taurus, farm, feces, kazakhstan, cattle, west kazakhstan province, pasture feeding)2025-12-03v31 / 575pendingNo
1897gpt-5Alatau breed cattle fecal samples (common bos taurus, male, female sterile, farm, female reproductive system disease, pasture, feces, kazakhstan, ovariectomized female, alatau, female, male)2025-12-03v31 / 623pendingNo

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