Experiment ID: 1896

Field Description
namestudy of cattle microbiota in different regions of kazakhstan using 16s metabarcoding analysis (9525287) - gpt-5
proj_id9525287
sraprjna847733
date_of_upload03/12/2025 02:13
doi10.1038/s41598-022-20732-4
modelgpt-5
dbbact_id940
dbbact_linkhttps://dbbact.org/exp_info/940
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
kazakhstan0.333333
LOWER IN kazakhstan0.333333
ovariectomized female0.315789
cattle0.285714
mixed0.285714
LOWER IN pasture0.285714
west kazakhstan province0.260870
pasture0.254545
LOWER IN ovariectomized female0.250000
LOWER IN mixed0.206897
LOWER IN cattle0.206897
LOWER IN farm0.166667
LOWER IN bos taurus0.166667
LOWER IN male organism0.125000
LOWER IN female organism0.090909
LOWER IN west kazakhstan province0.086957
male organism0.055046
bos taurus0.052632
female organism0.049587
LOWER IN male0.037383
LOWER IN female0.032258
LOWER IN feces0.031250
farm0.023256
male0.019868
female0.012320
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
west kazakhstan province1.000000
LOWER IN kazakhstan1.000000
cattle0.333333
mixed0.333333
ovariectomized female0.333333
LOWER IN mixed0.333333
LOWER IN pasture0.333333
LOWER IN cattle0.333333
LOWER IN west kazakhstan province0.333333
LOWER IN ovariectomized female0.333333
kazakhstan0.200000
pasture0.200000
LOWER IN farm0.142857
LOWER IN bos taurus0.142857
LOWER IN male organism0.090909
LOWER IN female organism0.058824
male organism0.030303
bos taurus0.027027
female organism0.027027
LOWER IN male0.019608
LOWER IN female0.017544
LOWER IN feces0.016949
farm0.011765
male0.010101
female0.006289
feces0.001148
Exp. ID User ID Description Date Region Sequences Status Flag
1896gpt-5Beef-focused international breed vs Alatau: Aberdeen Angus vs Alatau ( high in hay-concentrate feeding aberdeen angus compared to alatau pasture in female sterile farm bos taurus male female organism male ovariectomized female female reproductive system disease feces kazakhstan male organism female )2025-12-03v31 / 6pendingNo
1896gpt-5North–South gradient in cattle gut microbiome: Northern vs Southern Kazakhstan ( high in female sterile farm bos taurus male haylage-hay-concentrate feeding female organism male cattle ovariectomized female female reproductive system disease feces kazakhstan male organism female compared to kazakhstan farm bos taurus mankent feces beef cattle turkestan region in hay-concentrate feeding )2025-12-03v31 / 7pendingNo
1896gpt-5Southeast (Almaty region) Kazakhstan cattle fecal samples (dominant pasture, farm, silage, bos taurus, feces, kazakhstan, mixed)2025-12-03v31 / 9pendingNo
1896gpt-5Western Kazakhstan cattle fecal samples (dominant farm, bos taurus, pasture feeding, feces, cattle, west kazakhstan province, kazakhstan)2025-12-03v31 / 11pendingNo
1896gpt-5Kazakh white-headed cattle fecal samples (dominant farm, bos taurus, feces, kazakhstan, hay-concentrate feeding, kazakh white-headed)2025-12-03v31 / 15pendingNo
1896gpt-5North–South gradient in cattle gut microbiome: Northern vs Southern Kazakhstan ( high in kazakhstan farm bos taurus mankent feces beef cattle turkestan region compared to female sterile farm bos taurus male haylage-hay-concentrate feeding female organism male cattle ovariectomized female female reproductive system disease feces kazakhstan male organism female in hay-concentrate feeding )2025-12-03v31 / 16pendingNo
1896gpt-5Native vs composite dairy/beef breed: Kazakh white-headed vs Alatau ( high in hay-concentrate feeding kazakh white-headed compared to pasture female sterile male alatau female organism male ovariectomized female female reproductive system disease male organism female in kazakhstan farm bos taurus feces )2025-12-03v31 / 18pendingNo
1896gpt-5Breed-associated microbiome differences: Aberdeen Angus vs Kazakh white-headed ( high in kazakh white-headed compared to female sterile male aberdeen angus female organism male ovariectomized female female reproductive system disease male organism female in farm bos taurus feces kazakhstan hay-concentrate feeding )2025-12-03v31 / 20pendingNo
1896gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in female sterile male haylage-hay-concentrate feeding female organism male cattle ovariectomized female female reproductive system disease hay-concentrate feeding male organism female compared to silage mixed pasture in kazakhstan farm bos taurus feces )2025-12-03v31 / 27pendingNo
1896gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in silage mixed pasture compared to female sterile male haylage-hay-concentrate feeding female organism male cattle ovariectomized female female reproductive system disease hay-concentrate feeding male organism female in kazakhstan farm bos taurus feces )2025-12-03v31 / 39pendingNo
1896gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in silage mixed pasture compared to cattle pasture feeding west kazakhstan province in kazakhstan farm bos taurus feces )2025-12-03v31 / 46pendingNo
1896gpt-5Breed-associated microbiome differences: Aberdeen Angus vs Kazakh white-headed ( high in female sterile male aberdeen angus female organism male ovariectomized female female reproductive system disease male organism female compared to kazakh white-headed in farm bos taurus feces kazakhstan hay-concentrate feeding )2025-12-03v31 / 92pendingNo
1896gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in kazakhstan farm bos taurus mankent feces hay-concentrate feeding beef cattle turkestan region compared to pasture farm silage bos taurus feces kazakhstan mixed in )2025-12-03v31 / 123pendingNo
1896gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in cattle pasture feeding west kazakhstan province compared to silage mixed pasture in kazakhstan farm bos taurus feces )2025-12-03v31 / 136pendingNo
1896gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in pasture farm silage bos taurus feces kazakhstan mixed compared to kazakhstan farm bos taurus mankent feces hay-concentrate feeding beef cattle turkestan region in )2025-12-03v31 / 165pendingNo
1896gpt-5Beef-focused international breed vs Alatau: Aberdeen Angus vs Alatau ( high in alatau pasture compared to hay-concentrate feeding aberdeen angus in female sterile farm bos taurus male female organism male ovariectomized female female reproductive system disease feces kazakhstan male organism female )2025-12-03v31 / 170pendingNo
1896gpt-5Kazakh white-headed cattle fecal samples (common farm, bos taurus, feces, kazakhstan, hay-concentrate feeding, kazakh white-headed)2025-12-03v31 / 310pendingNo
1896gpt-5Native vs composite dairy/beef breed: Kazakh white-headed vs Alatau ( high in pasture female sterile male alatau female organism male ovariectomized female female reproductive system disease male organism female compared to hay-concentrate feeding kazakh white-headed in kazakhstan farm bos taurus feces )2025-12-03v31 / 502pendingNo
1896gpt-5Southeast (Almaty region) Kazakhstan cattle fecal samples (common pasture, farm, silage, bos taurus, feces, kazakhstan, mixed)2025-12-03v31 / 543pendingNo
1896gpt-5Western Kazakhstan cattle fecal samples (common farm, bos taurus, pasture feeding, feces, cattle, west kazakhstan province, kazakhstan)2025-12-03v31 / 575pendingNo

Problems / suggestions? Please visit the dbBact forum