Experiment ID: 1895

Field Description
namestudy of cattle microbiota in different regions of kazakhstan using 16s metabarcoding analysis (9525287) - gpt-5
proj_id9525287
sraprjna847733
date_of_upload03/12/2025 02:07
doi10.1038/s41598-022-20732-4
modelgpt-5
dbbact_id940
dbbact_linkhttps://dbbact.org/exp_info/940
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
LOWER IN kazakhstan0.400000
ovariectomized female0.352941
kazakhstan0.333333
LOWER IN pasture0.322581
LOWER IN ovariectomized female0.285714
pasture0.243902
mixed0.240000
cattle0.240000
LOWER IN mixed0.240000
LOWER IN cattle0.240000
LOWER IN farm0.181818
LOWER IN bos taurus0.181818
LOWER IN male organism0.133333
west kazakhstan province0.117647
LOWER IN west kazakhstan province0.105263
LOWER IN female organism0.095238
male organism0.056075
bos taurus0.052632
female organism0.050420
LOWER IN male0.037736
LOWER IN female0.032787
LOWER IN feces0.031746
farm0.023256
male0.019934
female0.012371
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN kazakhstan1.000000
west kazakhstan province1.000000
ovariectomized female0.333333
mixed0.333333
cattle0.333333
LOWER IN pasture0.333333
LOWER IN mixed0.333333
LOWER IN cattle0.333333
LOWER IN ovariectomized female0.333333
LOWER IN west kazakhstan province0.333333
pasture0.200000
kazakhstan0.200000
LOWER IN farm0.142857
LOWER IN bos taurus0.142857
LOWER IN male organism0.090909
LOWER IN female organism0.058824
male organism0.030303
female organism0.027027
bos taurus0.027027
LOWER IN male0.019608
LOWER IN female0.017544
LOWER IN feces0.016949
farm0.011765
male0.010101
female0.006289
feces0.001148
Exp. ID User ID Description Date Region Sequences Status Flag
1895gpt-5Beef-focused international breed vs Alatau: Aberdeen Angus vs Alatau ( high in hay-concentrate feeding aberdeen angus compared to pasture alatau in male kazakhstan bos taurus female organism female reproductive system disease ovariectomized female male organism male female female sterile farm feces )2025-12-03v31 / 5pendingNo
1895gpt-5North–South gradient in cattle gut microbiome: Northern vs Southern Kazakhstan ( high in male kazakhstan cattle bos taurus haylage-hay-concentrate feeding female organism female reproductive system disease ovariectomized female male male organism female female sterile farm feces compared to farm turkestan region bos taurus kazakhstan feces mankent beef cattle in hay-concentrate feeding )2025-12-03v31 / 7pendingNo
1895gpt-5Breed-focused baseline characterization (dominant kazakhstan, bos taurus, feces, farm)2025-12-03v31 / 11pendingNo
1895gpt-5Breed-associated microbiome differences: Aberdeen Angus vs Kazakh white-headed ( high in kazakh white-headed compared to male female organism female reproductive system disease male organism ovariectomized female male female female sterile aberdeen angus in kazakhstan hay-concentrate feeding bos taurus farm feces )2025-12-03v31 / 24pendingNo
1895gpt-5Native vs composite dairy/beef breed: Kazakh white-headed vs Alatau ( high in hay-concentrate feeding kazakh white-headed compared to pasture male female organism female reproductive system disease male organism ovariectomized female male female female sterile alatau in kazakhstan bos taurus feces farm )2025-12-03v31 / 24pendingNo
1895gpt-5North–South gradient in cattle gut microbiome: Northern vs Southern Kazakhstan ( high in farm turkestan region bos taurus kazakhstan feces mankent beef cattle compared to male kazakhstan cattle bos taurus haylage-hay-concentrate feeding female organism female reproductive system disease ovariectomized female male male organism female female sterile farm feces in hay-concentrate feeding )2025-12-03v31 / 25pendingNo
1895gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in pasture mixed silage compared to west kazakhstan province pasture feeding cattle in kazakhstan bos taurus feces farm )2025-12-03v31 / 33pendingNo
1895gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in male cattle hay-concentrate feeding haylage-hay-concentrate feeding female organism female reproductive system disease ovariectomized female male male organism female female sterile compared to pasture mixed silage in kazakhstan bos taurus feces farm )2025-12-03v31 / 43pendingNo
1895gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in pasture mixed silage compared to male cattle hay-concentrate feeding haylage-hay-concentrate feeding female organism female reproductive system disease ovariectomized female male male organism female female sterile in kazakhstan bos taurus feces farm )2025-12-03v31 / 90pendingNo
1895gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in farm turkestan region hay-concentrate feeding bos taurus feces mankent kazakhstan beef cattle compared to pasture kazakhstan bos taurus silage farm mixed feces in )2025-12-03v31 / 96pendingNo
1895gpt-5Breed-associated microbiome differences: Aberdeen Angus vs Kazakh white-headed ( high in male female organism female reproductive system disease male organism ovariectomized female male female female sterile aberdeen angus compared to kazakh white-headed in kazakhstan hay-concentrate feeding bos taurus farm feces )2025-12-03v31 / 98pendingNo
1895gpt-5Beef-focused international breed vs Alatau: Aberdeen Angus vs Alatau ( high in pasture alatau compared to hay-concentrate feeding aberdeen angus in male kazakhstan bos taurus female organism female reproductive system disease ovariectomized female male organism male female female sterile farm feces )2025-12-03v31 / 108pendingNo
1895gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in west kazakhstan province pasture feeding cattle compared to pasture mixed silage in kazakhstan bos taurus feces farm )2025-12-03v31 / 120pendingNo
1895gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in pasture kazakhstan bos taurus silage farm mixed feces compared to farm turkestan region hay-concentrate feeding bos taurus feces mankent kazakhstan beef cattle in )2025-12-03v31 / 147pendingNo
1895gpt-5Breed-focused baseline characterization (common kazakhstan, bos taurus, feces, farm)2025-12-03v31 / 334pendingNo
1895gpt-5Native vs composite dairy/beef breed: Kazakh white-headed vs Alatau ( high in pasture male female organism female reproductive system disease male organism ovariectomized female male female female sterile alatau compared to hay-concentrate feeding kazakh white-headed in kazakhstan bos taurus feces farm )2025-12-03v31 / 525pendingNo

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