Experiment ID: 1894

Field Description
namestudy of cattle microbiota in different regions of kazakhstan using 16s metabarcoding analysis (9525287) - gpt-5
proj_id9525287
sraprjna847733
date_of_upload03/12/2025 02:00
doi10.1038/s41598-022-20732-4
modelgpt-5
dbbact_id940
dbbact_linkhttps://dbbact.org/exp_info/940
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
kazakhstan0.333333
ovariectomized female0.285714
LOWER IN kazakhstan0.285714
cattle0.256410
mixed0.256410
LOWER IN pasture0.256410
pasture0.237288
west kazakhstan province0.222222
LOWER IN ovariectomized female0.222222
LOWER IN mixed0.181818
LOWER IN cattle0.181818
LOWER IN bos taurus0.153846
LOWER IN farm0.153846
LOWER IN male organism0.117647
LOWER IN female organism0.086957
LOWER IN west kazakhstan province0.074074
male organism0.054054
bos taurus0.052632
female organism0.048780
LOWER IN male0.037037
LOWER IN female0.031746
LOWER IN feces0.030769
farm0.023256
male0.019802
female0.012270
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
west kazakhstan province1.000000
LOWER IN kazakhstan1.000000
ovariectomized female0.333333
cattle0.333333
mixed0.333333
LOWER IN mixed0.333333
LOWER IN pasture0.333333
LOWER IN ovariectomized female0.333333
LOWER IN cattle0.333333
LOWER IN west kazakhstan province0.333333
pasture0.200000
kazakhstan0.200000
LOWER IN bos taurus0.142857
LOWER IN farm0.142857
LOWER IN male organism0.090909
LOWER IN female organism0.058824
male organism0.030303
female organism0.027027
bos taurus0.027027
LOWER IN male0.019608
LOWER IN female0.017544
LOWER IN feces0.016949
farm0.011765
male0.010101
female0.006289
feces0.001148
Exp. ID User ID Description Date Region Sequences Status Flag
1894gpt-5North–South gradient in cattle gut microbiome: Northern vs Southern Kazakhstan ( high in feces male female female organism cattle ovariectomized female male female sterile farm male organism haylage-hay-concentrate feeding bos taurus female reproductive system disease kazakhstan compared to bos taurus farm turkestan region feces mankent beef cattle kazakhstan in hay-concentrate feeding )2025-12-03v31 / 2pendingNo
1894gpt-5Southeast (Almaty region) Kazakhstan cattle fecal samples (dominant feces, mixed, pasture, farm, silage, bos taurus, kazakhstan)2025-12-03v31 / 9pendingNo
1894gpt-5Western Kazakhstan cattle fecal samples (dominant feces, west kazakhstan province, cattle, pasture feeding, farm, bos taurus, kazakhstan)2025-12-03v31 / 11pendingNo
1894gpt-5Breed-focused baseline characterization (dominant feces, farm, bos taurus, kazakhstan)2025-12-03v31 / 11pendingNo
1894gpt-5Southern Kazakhstan cattle fecal samples (dominant bos taurus, farm, hay-concentrate feeding, turkestan region, feces, mankent, beef cattle, kazakhstan)2025-12-03v31 / 14pendingNo
1894gpt-5Kazakh white-headed cattle fecal samples (dominant feces, kazakh white-headed, hay-concentrate feeding, farm, bos taurus, kazakhstan)2025-12-03v31 / 15pendingNo
1894gpt-5North–South gradient in cattle gut microbiome: Northern vs Southern Kazakhstan ( high in bos taurus farm turkestan region feces mankent beef cattle kazakhstan compared to feces male female female organism cattle ovariectomized female male female sterile farm male organism haylage-hay-concentrate feeding bos taurus female reproductive system disease kazakhstan in hay-concentrate feeding )2025-12-03v31 / 15pendingNo
1894gpt-5Beef-focused international breed vs Alatau: Aberdeen Angus vs Alatau ( high in aberdeen angus hay-concentrate feeding compared to pasture alatau in feces male female ovariectomized female male female sterile farm male organism female organism bos taurus female reproductive system disease kazakhstan )2025-12-03v31 / 17pendingNo
1894gpt-5Breed-associated microbiome differences: Aberdeen Angus vs Kazakh white-headed ( high in kazakh white-headed compared to aberdeen angus female male ovariectomized female male female sterile male organism female organism female reproductive system disease in feces hay-concentrate feeding farm bos taurus kazakhstan )2025-12-03v31 / 20pendingNo
1894gpt-5Native vs composite dairy/beef breed: Kazakh white-headed vs Alatau ( high in hay-concentrate feeding kazakh white-headed compared to male female ovariectomized female alatau male female sterile pasture male organism female organism female reproductive system disease in feces farm bos taurus kazakhstan )2025-12-03v31 / 31pendingNo
1894gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in mixed pasture silage compared to west kazakhstan province pasture feeding cattle in feces farm bos taurus kazakhstan )2025-12-03v31 / 38pendingNo
1894gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in male female female organism hay-concentrate feeding ovariectomized female male female sterile male organism haylage-hay-concentrate feeding female reproductive system disease cattle compared to mixed pasture silage in feces farm bos taurus kazakhstan )2025-12-03v31 / 61pendingNo
1894gpt-5Breed-associated microbiome differences: Aberdeen Angus vs Kazakh white-headed ( high in aberdeen angus female male ovariectomized female male female sterile male organism female organism female reproductive system disease compared to kazakh white-headed in feces hay-concentrate feeding farm bos taurus kazakhstan )2025-12-03v31 / 88pendingNo
1894gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in bos taurus farm hay-concentrate feeding turkestan region feces mankent beef cattle kazakhstan compared to feces mixed pasture farm silage bos taurus kazakhstan in )2025-12-03v31 / 96pendingNo
1894gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Northern Kazakhstan ( high in mixed pasture silage compared to male female female organism hay-concentrate feeding ovariectomized female male female sterile male organism haylage-hay-concentrate feeding female reproductive system disease cattle in feces farm bos taurus kazakhstan )2025-12-03v31 / 101pendingNo
1894gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Western Kazakhstan ( high in west kazakhstan province pasture feeding cattle compared to mixed pasture silage in feces farm bos taurus kazakhstan )2025-12-03v31 / 139pendingNo
1894gpt-5Regional variation of cattle gut microbiome: Southeast (Almaty) vs Southern Kazakhstan ( high in feces mixed pasture farm silage bos taurus kazakhstan compared to bos taurus farm hay-concentrate feeding turkestan region feces mankent beef cattle kazakhstan in )2025-12-03v31 / 141pendingNo
1894gpt-5Beef-focused international breed vs Alatau: Aberdeen Angus vs Alatau ( high in pasture alatau compared to aberdeen angus hay-concentrate feeding in feces male female ovariectomized female male female sterile farm male organism female organism bos taurus female reproductive system disease kazakhstan )2025-12-03v31 / 204pendingNo
1894gpt-5Kazakh white-headed cattle fecal samples (common feces, kazakh white-headed, hay-concentrate feeding, farm, bos taurus, kazakhstan)2025-12-03v31 / 310pendingNo
1894gpt-5Breed-focused baseline characterization (common feces, farm, bos taurus, kazakhstan)2025-12-03v31 / 334pendingNo
1894gpt-5Southern Kazakhstan cattle fecal samples (common bos taurus, farm, hay-concentrate feeding, turkestan region, feces, mankent, beef cattle, kazakhstan)2025-12-03v31 / 436pendingNo
1894gpt-5Southeast (Almaty region) Kazakhstan cattle fecal samples (common feces, mixed, pasture, farm, silage, bos taurus, kazakhstan)2025-12-03v31 / 543pendingNo
1894gpt-5Western Kazakhstan cattle fecal samples (common feces, west kazakhstan province, cattle, pasture feeding, farm, bos taurus, kazakhstan)2025-12-03v31 / 575pendingNo
1894gpt-5Native vs composite dairy/beef breed: Kazakh white-headed vs Alatau ( high in male female ovariectomized female alatau male female sterile pasture male organism female organism female reproductive system disease compared to hay-concentrate feeding kazakh white-headed in feces farm bos taurus kazakhstan )2025-12-03v31 / 625pendingNo

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