Experiment ID: 1858

Field Description
namemarket integration predicts human gut microbiome attributes across a gradient of economic development (5829308) - gpt-5
proj_id5829308
sraprjna362944
date_of_upload15/11/2025 20:25
doi10.1128/msystems.00122-17
modelgpt-5
dbbact_id660
dbbact_linkhttps://dbbact.org/exp_info/660
needs_manual_reviewtrue

Annotations for experiment:

Fraction of annotations for the query sequences containing the term
TermScore
intestine1.000000
homo sapiens1.000000
morona-santiago province1.000000
market integration1.000000
ecuador1.000000
shuar population1.000000
feces1.000000
2-5 year-old child stage0.250000
child stage0.250000
6-12 year-old child stage0.250000
human middle aged stage0.250000
34-year-old human stage0.250000
38-year-old human stage0.250000
52-year-old human stage0.250000
human aged stage0.250000
30-year-old human stage0.250000
56-year-old human stage0.250000
young adult stage0.250000
48-year-old human stage0.250000
36-year-old human stage0.250000
18-year-old human stage0.250000
24-year-old human stage0.250000
20-year-old human stage0.250000
39-year-old human stage0.250000
25-year-old human stage0.250000
22-year-old human stage0.250000
74-year-old human stage0.250000
29-year-old human stage0.250000
21-year-old human stage0.250000
42-year-old human stage0.250000
54-year-old human stage0.250000
40-year-old human stage0.250000
37-year-old human stage0.250000
28-year-old human stage0.250000
25-44 year-old human stage0.250000
33-year-old human stage0.250000
64-year-old human stage0.250000
46-year-old human stage0.250000
adolescent stage0.250000
32-year-old human stage0.250000
44-year-old human stage0.250000
100-year-old human stage0.250000
31-year-old human stage0.250000
43-year-old human stage0.250000
19-year-old human stage0.250000
47-year-old human stage0.250000
53-year-old human stage0.250000
49-year-old human stage0.250000
45-year-old human stage0.250000
human house0.166667
LOWER IN human middle aged stage0.083333
LOWER IN 34-year-old human stage0.083333
LOWER IN 38-year-old human stage0.083333
LOWER IN 52-year-old human stage0.083333
LOWER IN human aged stage0.083333
LOWER IN 30-year-old human stage0.083333
LOWER IN 56-year-old human stage0.083333
LOWER IN young adult stage0.083333
LOWER IN 48-year-old human stage0.083333
LOWER IN 36-year-old human stage0.083333
LOWER IN 18-year-old human stage0.083333
LOWER IN 24-year-old human stage0.083333
LOWER IN 20-year-old human stage0.083333
LOWER IN 39-year-old human stage0.083333
LOWER IN 25-year-old human stage0.083333
LOWER IN 22-year-old human stage0.083333
LOWER IN 74-year-old human stage0.083333
LOWER IN 29-year-old human stage0.083333
LOWER IN 21-year-old human stage0.083333
LOWER IN 42-year-old human stage0.083333
LOWER IN 54-year-old human stage0.083333
LOWER IN 40-year-old human stage0.083333
LOWER IN 37-year-old human stage0.083333
LOWER IN 28-year-old human stage0.083333
LOWER IN 25-44 year-old human stage0.083333
LOWER IN 33-year-old human stage0.083333
LOWER IN 64-year-old human stage0.083333
LOWER IN 46-year-old human stage0.083333
LOWER IN adolescent stage0.083333
LOWER IN 32-year-old human stage0.083333
LOWER IN 44-year-old human stage0.083333
LOWER IN 100-year-old human stage0.083333
LOWER IN 31-year-old human stage0.083333
LOWER IN 43-year-old human stage0.083333
LOWER IN 19-year-old human stage0.083333
LOWER IN 47-year-old human stage0.083333
LOWER IN 53-year-old human stage0.083333
LOWER IN 49-year-old human stage0.083333
LOWER IN 45-year-old human stage0.083333
LOWER IN 2-5 year-old child stage0.083333
LOWER IN child stage0.083333
LOWER IN 6-12 year-old child stage0.083333
Number of experiments associating the term to the sequence
TermScore
2-5 year-old child stage1.000000
child stage1.000000
6-12 year-old child stage1.000000
LOWER IN human middle aged stage1.000000
LOWER IN 34-year-old human stage1.000000
LOWER IN 38-year-old human stage1.000000
LOWER IN 52-year-old human stage1.000000
LOWER IN human aged stage1.000000
LOWER IN 30-year-old human stage1.000000
LOWER IN 56-year-old human stage1.000000
LOWER IN young adult stage1.000000
LOWER IN 48-year-old human stage1.000000
LOWER IN 36-year-old human stage1.000000
LOWER IN 18-year-old human stage1.000000
LOWER IN 24-year-old human stage1.000000
LOWER IN 20-year-old human stage1.000000
LOWER IN 39-year-old human stage1.000000
LOWER IN 25-year-old human stage1.000000
LOWER IN 22-year-old human stage1.000000
LOWER IN 74-year-old human stage1.000000
LOWER IN 29-year-old human stage1.000000
LOWER IN 21-year-old human stage1.000000
LOWER IN 42-year-old human stage1.000000
LOWER IN 54-year-old human stage1.000000
LOWER IN 40-year-old human stage1.000000
LOWER IN 37-year-old human stage1.000000
LOWER IN 28-year-old human stage1.000000
LOWER IN 25-44 year-old human stage1.000000
LOWER IN 33-year-old human stage1.000000
LOWER IN 64-year-old human stage1.000000
LOWER IN 46-year-old human stage1.000000
LOWER IN adolescent stage1.000000
LOWER IN 32-year-old human stage1.000000
LOWER IN 44-year-old human stage1.000000
LOWER IN 100-year-old human stage1.000000
LOWER IN 31-year-old human stage1.000000
LOWER IN 43-year-old human stage1.000000
LOWER IN 19-year-old human stage1.000000
LOWER IN 47-year-old human stage1.000000
LOWER IN 53-year-old human stage1.000000
LOWER IN 49-year-old human stage1.000000
LOWER IN 45-year-old human stage1.000000
intestine1.000000
homo sapiens1.000000
morona-santiago province1.000000
market integration1.000000
ecuador1.000000
shuar population1.000000
feces1.000000
human house1.000000
human middle aged stage1.000000
34-year-old human stage1.000000
38-year-old human stage1.000000
52-year-old human stage1.000000
human aged stage1.000000
30-year-old human stage1.000000
56-year-old human stage1.000000
young adult stage1.000000
48-year-old human stage1.000000
36-year-old human stage1.000000
18-year-old human stage1.000000
24-year-old human stage1.000000
20-year-old human stage1.000000
39-year-old human stage1.000000
25-year-old human stage1.000000
22-year-old human stage1.000000
74-year-old human stage1.000000
29-year-old human stage1.000000
21-year-old human stage1.000000
42-year-old human stage1.000000
54-year-old human stage1.000000
40-year-old human stage1.000000
37-year-old human stage1.000000
28-year-old human stage1.000000
25-44 year-old human stage1.000000
33-year-old human stage1.000000
64-year-old human stage1.000000
46-year-old human stage1.000000
adolescent stage1.000000
32-year-old human stage1.000000
44-year-old human stage1.000000
100-year-old human stage1.000000
31-year-old human stage1.000000
43-year-old human stage1.000000
19-year-old human stage1.000000
47-year-old human stage1.000000
53-year-old human stage1.000000
49-year-old human stage1.000000
45-year-old human stage1.000000
LOWER IN 2-5 year-old child stage1.000000
LOWER IN child stage1.000000
LOWER IN 6-12 year-old child stage1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1858gpt-5Children approximately 3–12 years (by exact ages available) (dominant 2-5 year-old child stage, intestine, homo sapiens, 6-12 year-old child stage, morona-santiago province, market integration, ecuador, shuar population, feces, child stage)2025-11-15v41 / 16pendingNo
1858gpt-5Shuar human fecal samples (all) (dominant intestine, homo sapiens, morona-santiago province, market integration, human house, ecuador, shuar population, feces)2025-11-15v41 / 17pendingNo
1858gpt-5Adolescents and adults ≥18 years (by exact ages available) (dominant human middle aged stage, 34-year-old human stage, 38-year-old human stage, 52-year-old human stage, human aged stage, 30-year-old human stage, 56-year-old human stage, young adult stage, 48-year-old human stage, intestine, 36-year-old human stage, 18-year-old human stage, 24-year-old human stage, morona-santiago province, 20-year-old human stage, 39-year-old human stage, 25-year-old human stage, 22-year-old human stage, 74-year-old human stage, homo sapiens, 29-year-old human stage, ecuador, 21-year-old human stage, 42-year-old human stage, 54-year-old human stage, 40-year-old human stage, 37-year-old human stage, 28-year-old human stage, 25-44 year-old human stage, 33-year-old human stage, 64-year-old human stage, 46-year-old human stage, adolescent stage, 32-year-old human stage, 44-year-old human stage, 100-year-old human stage, 31-year-old human stage, 43-year-old human stage, 19-year-old human stage, 47-year-old human stage, 53-year-old human stage, market integration, 49-year-old human stage, 45-year-old human stage, shuar population, feces)2025-11-15v41 / 18pendingNo
1858gpt-52013 field season fecal samples (dominant intestine, homo sapiens, morona-santiago province, market integration, ecuador, shuar population, feces)2025-11-15v41 / 18pendingNo
1858gpt-52014 field season fecal samples (dominant intestine, homo sapiens, morona-santiago province, market integration, ecuador, shuar population, feces)2025-11-15v41 / 20pendingNo
1858gpt-5Age-associated differences: children (3–12y) vs adolescents/adults (≥18y) ( high in human middle aged stage 34-year-old human stage 38-year-old human stage 52-year-old human stage human aged stage 30-year-old human stage 56-year-old human stage young adult stage 48-year-old human stage 36-year-old human stage 18-year-old human stage 24-year-old human stage 20-year-old human stage 39-year-old human stage 25-year-old human stage 22-year-old human stage 74-year-old human stage 29-year-old human stage 21-year-old human stage 42-year-old human stage 54-year-old human stage 40-year-old human stage 37-year-old human stage 28-year-old human stage 25-44 year-old human stage 33-year-old human stage 64-year-old human stage 46-year-old human stage adolescent stage 32-year-old human stage 44-year-old human stage 100-year-old human stage 31-year-old human stage 43-year-old human stage 19-year-old human stage 47-year-old human stage 53-year-old human stage 49-year-old human stage 45-year-old human stage compared to 2-5 year-old child stage child stage 6-12 year-old child stage in intestine homo sapiens morona-santiago province market integration ecuador shuar population feces )2025-11-15v41 / 91pendingNo
1858gpt-5Adolescents and adults ≥18 years (by exact ages available) (common human middle aged stage, 34-year-old human stage, 38-year-old human stage, 52-year-old human stage, human aged stage, 30-year-old human stage, 56-year-old human stage, young adult stage, 48-year-old human stage, intestine, 36-year-old human stage, 18-year-old human stage, 24-year-old human stage, morona-santiago province, 20-year-old human stage, 39-year-old human stage, 25-year-old human stage, 22-year-old human stage, 74-year-old human stage, homo sapiens, 29-year-old human stage, ecuador, 21-year-old human stage, 42-year-old human stage, 54-year-old human stage, 40-year-old human stage, 37-year-old human stage, 28-year-old human stage, 25-44 year-old human stage, 33-year-old human stage, 64-year-old human stage, 46-year-old human stage, adolescent stage, 32-year-old human stage, 44-year-old human stage, 100-year-old human stage, 31-year-old human stage, 43-year-old human stage, 19-year-old human stage, 47-year-old human stage, 53-year-old human stage, market integration, 49-year-old human stage, 45-year-old human stage, shuar population, feces)2025-11-15v41 / 105pendingNo
1858gpt-52013 field season fecal samples (common intestine, homo sapiens, morona-santiago province, market integration, ecuador, shuar population, feces)2025-11-15v41 / 121pendingNo
1858gpt-52014 field season fecal samples (common intestine, homo sapiens, morona-santiago province, market integration, ecuador, shuar population, feces)2025-11-15v41 / 122pendingNo
1858gpt-5Shuar human fecal samples (all) (common intestine, homo sapiens, morona-santiago province, market integration, human house, ecuador, shuar population, feces)2025-11-15v41 / 123pendingNo
1858gpt-5Children approximately 3–12 years (by exact ages available) (common 2-5 year-old child stage, intestine, homo sapiens, 6-12 year-old child stage, morona-santiago province, market integration, ecuador, shuar population, feces, child stage)2025-11-15v41 / 129pendingNo
1858gpt-5Age-associated differences: children (3–12y) vs adolescents/adults (≥18y) ( high in 2-5 year-old child stage child stage 6-12 year-old child stage compared to human middle aged stage 34-year-old human stage 38-year-old human stage 52-year-old human stage human aged stage 30-year-old human stage 56-year-old human stage young adult stage 48-year-old human stage 36-year-old human stage 18-year-old human stage 24-year-old human stage 20-year-old human stage 39-year-old human stage 25-year-old human stage 22-year-old human stage 74-year-old human stage 29-year-old human stage 21-year-old human stage 42-year-old human stage 54-year-old human stage 40-year-old human stage 37-year-old human stage 28-year-old human stage 25-44 year-old human stage 33-year-old human stage 64-year-old human stage 46-year-old human stage adolescent stage 32-year-old human stage 44-year-old human stage 100-year-old human stage 31-year-old human stage 43-year-old human stage 19-year-old human stage 47-year-old human stage 53-year-old human stage 49-year-old human stage 45-year-old human stage in intestine homo sapiens morona-santiago province market integration ecuador shuar population feces )2025-11-15v41 / 247pendingNo

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